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34 lines
1018 B
Python
34 lines
1018 B
Python
import argparse
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import json
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import requests
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import yaml
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def main():
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parser = argparse.ArgumentParser(description='Upload a directory into a data library')
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parser.add_argument("-u", "--url", dest="url", required=True, help="Galaxy URL")
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parser.add_argument("-a", "--api", dest="api_key", required=True, help="API Key")
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parser.add_argument('target', metavar='FILE', type=str,
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help='file describing data library to fetch')
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args = parser.parse_args()
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with open(args.target, "r") as f:
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target = yaml.safe_load(f)
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histories_url = args.url + "/api/histories"
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new_history_response = requests.post(histories_url, data={'key': args.api_key})
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fetch_url = args.url + '/api/tools/fetch'
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payload = {
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'key': args.api_key,
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'targets': json.dumps([target]),
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'history_id': new_history_response.json()["id"]
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}
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response = requests.post(fetch_url, data=payload)
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print(response.content)
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if __name__ == '__main__':
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main()
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