Nicola Soranzo 9805294f97 Revert "Revert "[WIP] Mega flake8 linting"" ...

This reverts commit 37f1976d38.

2015-07-12 21:25:44 +01:00

..

capsule

Encapsulate the Tool Shed's metadata generator.

2014-09-04 13:14:00 -04:00

dependencies

Fix typo.

2015-06-02 14:42:33 -04:00

galaxy_install

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

grids

First pass removing to_json_string/from_json_string.

2014-09-08 16:41:53 -04:00

managers

add more fields; include category links; some minor bugfixes

2015-06-17 15:09:40 -04:00

metadata

Fix for generating metadata on toolshed tools, under certain conditions. One known condition is when a boolean parameter is declared, but has no value set.

2015-06-07 18:20:37 -04:00

repository_types

Continued down-sizing of the Tool Shed's shed_util_common module by moving certain functions to more appropriate locations. Some fixes for adding and removing entries to the Tool Shed's repository registry.

2014-05-28 11:17:50 -04:00

scripts

Manually cherry-pick ecf8973484248c37f8dc96670f14a5ecce1a0c18.

2015-06-25 11:23:10 -04:00

tools

Fix for abitrary code execution in the ToolShed when uploaded tools reference a <code file=...>.

2015-04-22 14:18:15 -04:00

util

PEP-8 and pylint fixes.

2015-06-16 16:53:49 +01:00

utility_containers

Add a UtilityContainerManager class and subclasses for displaying Tool Shed utility containers.

2014-07-31 15:27:21 -04:00

__init__.py

Move ~/lib/galaxy/tool_shed to ~/lib/tool_shed, and move the ~/lib/galaxy/util/shed_util componets to ~/lib/tool_shed/util.

2013-02-26 15:52:51 -05:00

repository_registry.py

Pes-8 fixes for the Tool Shed's repository_registry module.

2014-06-03 15:19:54 -04:00

tool_shed_registry.py

Handle changing http protocols in the tool shed registry's password_manager_for_url() function.

2014-04-28 15:58:48 -04:00