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24 lines
1.1 KiB
Python
24 lines
1.1 KiB
Python
from base.twilltestcase import TwillTestCase
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#from twilltestcase import TwillTestCase
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class EncodeTests(TwillTestCase):
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def test_00_first(self): # will run first due to its name
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"""3B_GetEncodeData: Clearing history"""
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self.clear_history()
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def test_10_Encode_Data(self):
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"""3B_GetEncodeData: Getting encode data"""
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self.run_tool('encode_import_chromatin_and_chromosomes1', hg17=['cc.EarlyRepSeg.20051216.bed'] )
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# hg17=[ "cc.EarlyRepSeg.20051216.bed", "cc.EarlyRepSeg.20051216.gencode_partitioned.bed", "cc.LateRepSeg.20051216.bed", "cc.LateRepSeg.20051216.gencode_partitioned.bed", "cc.MidRepSeg.20051216.bed", "cc.MidRepSeg.20051216.gencode_partitioned.bed" ] )
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self.wait()
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self.check_data('cc.EarlyRepSeg.20051216.bed', hid=1)
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# self.check_data('cc.EarlyRepSeg.20051216.gencode_partitioned.bed', hid=2)
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# self.check_data('cc.LateRepSeg.20051216.bed', hid=3)
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# self.check_data('cc.LateRepSeg.20051216.gencode_partitioned.bed', hid=4)
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# self.check_data('cc.MidRepSeg.20051216.bed', hid=5)
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# self.check_data('cc.MidRepSeg.20051216.gencode_partitioned.bed', hid=6)
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