Greg Von Kuster bcd6751cdf Fix for uploading a Bam file that has not yet been sorted, the call to samtools sort has been moved from the sam_to_bam tool to the Bam()set_meta() method to ensure all Bam datasets are sorted prior to indexing. Added new functional tests to cover uploaing unsorted Bam files. Also cleaned up code in the upload tool for uploaing various binary data formats.

2009-12-07 16:04:33 -05:00

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base

Request events & request rejection (resolves issue #221)

2009-11-25 14:06:28 -05:00

functional

Fix for uploading a Bam file that has not yet been sorted, the call to samtools sort has been moved from the sam_to_bam tool to the Bam()set_meta() method to ensure all Bam datasets are sorted prior to indexing. Added new functional tests to cover uploaing unsorted Bam files. Also cleaned up code in the upload tool for uploaing various binary data formats.

2009-12-07 16:04:33 -05:00

selenium

Modifying/adding selenium workflow tests to test for the grouping problem that was just fixed (need an input dataset within a group) as well as the input connection problem (need the last node created to have an output that is not compatible with all inputs)

2009-03-30 17:51:34 -04:00