John Chilton 16b5bb875f Refactor backbone models to allow different kinds of history contents. ...

In particular, add a new backbone parent model (HistoryContent) refactored out of HistoryDatasetAssociation. This makes room for a forth coming HistoryDatasetCollectionAssociation model that will be emitted from the history contents API.

There are likely better ways to share common functionality between a dataset and a dataset collection contents - more JS savy developers should feel free to refactor into smaller mixins for instance. For now HistoryContent is just composed of the overlap in functionality between dataset and collection representations downstream and is an quick and dirty way to share said functionality.

2014-05-06 08:54:30 -05:00

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libs

Correct usage of "it's" versus "its".

2014-04-17 15:49:32 -04:00

mvc

Refactor backbone models to allow different kinds of history contents.

2014-05-06 08:54:30 -05:00

nls

UI: rework zh and ja locale data

2014-04-22 11:58:22 -04:00

packed

data libraries: when importing into history set it as current and provide link to the 'Analyze page' so users can switch quickly

2014-05-05 13:51:13 -04:00

rgenetics

More JS file reorganization: (a) move IE and rgenetics into their own directories; (b) move additional external libraries to libs.

2012-08-21 16:54:19 -04:00

templates

Remove handlebars common-template helpers, remove unused templates

2014-03-20 14:16:13 -04:00

tools/rgenetics

moved the rgGRR svg scripts to static/scripts/tools/rgenetics and decreased chattiness in genetics.py

2009-10-15 19:01:07 -04:00

utils

Metrics: make the cache use localStorage for persistence

2014-04-21 11:37:26 -04:00

viz

Trackster: add color for read track histograms so that histograms are colorful. Read blocks are still gray to allow for seeing variants easily.

2014-04-23 13:56:26 -04:00

base.js

trackster: misc fixes and reorganization

2012-09-17 16:14:52 -04:00

galaxy-app-base.js

QA: add qunit tests for galaxy-app-base; Fix defaults in metrics-logger tests

2014-04-18 09:56:31 -04:00

galaxy.autocom_tagging.js

style: remove use of tooltip class, always show tooltip for any element with title attribute, and use standard bootstrap tooltip component.

2013-09-09 13:40:13 -04:00

galaxy.base.js

Do not propagate keyboard events in JS editable text plugin; this prevents unwanted side effects with other elmements on the page using keyboard events.

2014-04-25 16:58:21 -04:00

galaxy.frame.js

UI: Modularize scratch book and make it reusable as regular ui element, refactor charts

2014-03-24 04:50:52 -04:00

galaxy.library.js

data libraries: router improvements, detecting whether the loaded page is the first page of the app (user came from outside) or within and navigating accordingly

2014-05-05 13:03:16 -04:00

galaxy.masthead.js

Fix small bug in handling of 'brand' text.

2014-01-20 09:39:12 -06:00

galaxy.menu.js

rename biostar menu link

2014-04-22 10:53:35 -04:00

galaxy.pages.js

History: remove unused server templates history_common, history_item, and history_annotation_table; Pages: remove unused dialog for annotated histories

2014-05-01 09:17:19 -04:00

galaxy.panels.js

UI: Increase minimum sidebar width

2014-01-24 17:49:22 -05:00

galaxy.tools.js

Outline galaxy.tools.js and load in tool_form.mako.

2014-02-10 21:34:42 -06:00

galaxy.ui.scrollPanel.js

Internet explorer fixes and support -- popup menus and dialogs work better on IE6+,

2008-08-22 17:47:43 -04:00

galaxy.workflow_editor.canvas.js

Workflow Editor: Merge addDataInput and replaceDataInput into common method.

2014-04-22 11:13:27 -05:00

galaxy.workflows.js

Refactor interaction between workflows JS and editor JS for adding nodes.

2014-04-10 13:31:47 -05:00

i18n.js

UI: add GalaxyApp to base_panels.mako; add requirejs i18n plugin and nls/zh, nls/ja locale files, wire into _l client localizer, remove previous localization cruft; remove reliance on history_panel.mako

2014-04-15 12:31:33 -04:00

pack_scripts.py

pack_scripts.py: have yuicompressor use utf-8 as the charset; remove unused packed scripts; update d3.js from 2.9.2 to 3.1.4

2013-04-02 14:20:55 -04:00