John Chilton f5d436f13e Datatype-based validation framework. ...

There was an attempt to do this over a decade ago that didn't take off:
- xref 925aec1bd0
- xref f4f9e1d7b2

2019-08-22 15:45:25 -04:00

..

converters

Decompose interval_to_tabix converter script

2017-12-08 15:18:56 +01:00

dataproviders

py3 port: testfile as text, add built-in as example w/o __iter__

2018-06-29 12:57:41 -05:00

__init__.py

Testing: move managers, web/base, datatypes/dataproviders, and visualization 'unit'(?) tests to using common mock objects and loading system; cleanup

2015-04-16 10:25:34 -04:00

test_bam.py

Rename 2.shuffled.bam to 2.shuffled.unsorted.bam

2018-10-30 09:27:25 +01:00

test_bcf.py

Fix index file syntax and fix linting problems

2017-12-08 11:35:31 +01:00

test_cram.py

one more linting fix

2017-12-08 11:35:31 +01:00

test_data.py

Fix extra newlines in peek code.

2019-05-15 15:56:06 -04:00

test_datatypes_registry.py

Fixes at least 4 more bugs related to sniffing of compressed datatypes.

2018-05-10 18:35:26 -04:00

test_sniff.py

Use temporary file for tests

2019-07-08 12:45:10 +01:00

test_validation.py

Datatype-based validation framework.

2019-08-22 15:45:25 -04:00

test_vcf.py

Fix upload of gzipped VCF files

2019-05-10 19:47:48 +01:00

util.py

Improvements to datatypes suggested by @nsoranzo

2017-12-10 12:13:37 +01:00