Files
galaxy/tools/filters/catWrapper.py
T

32 lines
571 B
Python

#!/usr/bin/env python
# By Guruprasad Ananda.
import os
import shutil
import sys
def stop_err(msg):
sys.stderr.write(msg)
sys.exit()
def main():
outfile = sys.argv[1]
infile = sys.argv[2]
if len(sys.argv) < 4:
shutil.copyfile(infile, outfile)
sys.exit()
cmdline = "cat %s " % (infile)
for inp in sys.argv[3:]:
cmdline = cmdline + inp + " "
cmdline = cmdline + ">" + outfile
try:
os.system(cmdline)
except:
stop_err("Error encountered with cat.")
if __name__ == "__main__":
main()