Files
galaxy/run_tool_shed.sh
T

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#!/bin/sh
cd `dirname $0`
: ${GALAXY_VIRTUAL_ENV:=.venv}
if [ -d "$GALAXY_VIRTUAL_ENV" ];
then
. "$GALAXY_VIRTUAL_ENV/bin/activate"
fi
./scripts/common_startup.sh
: ${GALAXY_VIRTUAL_ENV:=.venv}
if [ -d "$GALAXY_VIRTUAL_ENV" ];
then
. "$GALAXY_VIRTUAL_ENV/bin/activate"
fi
tool_shed=`./scripts/tool_shed/bootstrap_tool_shed/parse_run_sh_args.sh $@`
args=$@
if [ $? -eq 0 ] ; then
bash ./scripts/tool_shed/bootstrap_tool_shed/parse_run_sh_args.sh $@
args=`echo $@ | sed "s#-\?-bootstrap_from_tool_shed $tool_shed##"`
fi
if [ -z "$TOOL_SHED_CONFIG_FILE" ]; then
if [ -f tool_shed_wsgi.ini ]; then
TOOL_SHED_CONFIG_FILE=tool_shed_wsgi.ini
elif [ -f config/tool_shed.ini ]; then
TOOL_SHED_CONFIG_FILE=config/tool_shed.ini
else
TOOL_SHED_CONFIG_FILE=config/tool_shed.ini.sample
fi
export TOOL_SHED_CONFIG_FILE
fi
python ./scripts/paster.py serve $TOOL_SHED_CONFIG_FILE --pid-file=tool_shed_webapp.pid --log-file=tool_shed_webapp.log $args