Ross Lazarus aaca176ed7 Add mimetypes to snp/wga datatypes in genetics.py ...

Fix edit_attributes to snp/wga composite files in tests

2010-05-11 11:51:49 -04:00

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__init__.py

New functional test harness. Update to recent nose. No longer rely on nose to manage the embedded web server (this is not done in functional_tests.py). Log page contents to a temporary file on check_page_for_string error.

2009-10-20 13:08:29 -04:00

test_admin_features.py

Handle user registration and login in the galaxy_main frame to ensure masthead. After registration or login, use javascript to redirect to the page the user was viewing when they attempted login. If javascript is disabled, a page will be displayed with links to the page they were visiting or the home page. Revamp functional tests to cover new behavior. Fix bugs where the username was not validated when a user registered, and add functional tests to cover. Fix a bug where the user's new session may have set it's history to the user's previous history, even if the history was deleted. Now a new history will be created for the current session instead. Add a new logout.mako template, and remove a create.mako template that was no longer used.

2010-04-02 15:00:53 -04:00

test_data_security.py

De-couple the user controller from the model, adding a webapp param to some method signatures to allow for different webapps to use the controller. Clean up the methods in the controller, eliminating all that are no longer used. Fix the verification mehtod for resetting user names to use rules for setting user names. Add new mako templates for the login and reset password methods instead of the inline form building. Fix a bug where the user's private roles was not correctly updated when the user's email address was changed. Overhaul the test_user_info functional test script, cleaning up the mehtod code and to provide coverage for all of the above fixed bugs.

2010-03-31 09:42:50 -04:00

test_DNAse_flanked_genes.py

Fix most of the db flushes to be compatibel with sqlalchemy 05. Add the _monkeypatch_query_method() back into assignmapper due to a single object.get() method in the MetadataCollection class since Metadata has no current hook into mapping.context ( the sqlalchemy session ). There a 4 flushes in metadata,py and 20 flushes in model.__init__.py that still use the _monkeypatch_session_method in assignmapper due to the same issue, but all other flushes are fixed.

2009-11-11 15:59:41 -05:00

test_forms_and_requests.py

lims:

2010-04-23 15:31:52 -04:00

test_get_data.py

Added new tabular/pileup join tool and associated test files. Also added pileup datatype.

2010-03-26 12:00:55 -04:00

test_history_functions.py

Bug fixes for history import: (a) import can now be used by users who have access via sharing and (b) import changes the current history to the imported history. Functional tests updated to reflect new functionality and error messages.

2010-05-02 15:34:41 -04:00

test_library_features.py

Allow non-admin users that have the LIBRARY_MODIFY permission to delete / undelete library items as well as display / hide deleted library items.

2010-04-14 15:16:03 -04:00

test_library_security.py

Allow non-admin users that have the LIBRARY_MODIFY permission to delete / undelete library items as well as display / hide deleted library items.

2010-04-14 15:16:03 -04:00

test_metadata_editing.py

De-couple the user controller from the model, adding a webapp param to some method signatures to allow for different webapps to use the controller. Clean up the methods in the controller, eliminating all that are no longer used. Fix the verification mehtod for resetting user names to use rules for setting user names. Add new mako templates for the login and reset password methods instead of the inline form building. Fix a bug where the user's private roles was not correctly updated when the user's email address was changed. Overhaul the test_user_info functional test script, cleaning up the mehtod code and to provide coverage for all of the above fixed bugs.

2010-03-31 09:42:50 -04:00

test_tags.py

Decouple the TagHandler from the model by allowing sub-classes to point to a specified model. Add a baseline functional tests script to provide coverage for tagging histories and history items ( more coverage is needed, of course, and can easily be added to this script ).

2010-04-13 15:35:32 -04:00

test_toolbox.py

Add mimetypes to snp/wga datatypes in genetics.py

2010-05-11 11:51:49 -04:00

test_user_info.py

fixed forms and user_info functional tests

2010-04-13 10:16:46 -04:00