Files
galaxy/tools/filters/commWrapper.pl
T
2019-10-26 20:20:01 +01:00

17 lines
330 B
Perl

#! /usr/bin/env perl
use strict;
use warnings;
use File::Temp "tempfile";
#use POSIX qw(tmpnam);
my ($input1, $input2, $mode, $out_file1) = @ARGV;
my ($fh, $file1) = tempfile();
my ($fh1,$file2) = tempfile();
`sort $input1 > $file1`;
`sort $input2 > $file2`;
`comm $mode $file1 $file2 > $out_file1`;
`rm $file1 ; rm $file2`;