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https://github.com/galaxyproject/galaxy.git
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Marius van den Beek
36 lines
2.0 KiB
XML
36 lines
2.0 KiB
XML
<?xml version="1.0"?>
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<!-- A sample job config for InteractiveTools using local runner. -->
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<job_conf>
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<plugins>
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<plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/>
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</plugins>
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<destinations default="docker_dispatch">
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<destination id="local" runner="local"/>
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<destination id="docker_local" runner="local">
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<param id="docker_enabled">true</param>
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<!-- If you have not set 'outputs_to_working_directory: true' in galaxy.yml you can remove the docker_volumes setting. -->
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<param id="docker_volumes">$galaxy_root:ro,$tool_directory:ro,$job_directory:rw,$working_directory:rw,$default_file_path:ro</param>
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<param id="docker_sudo">false</param>
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<param id="docker_net">bridge</param>
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<param id="docker_auto_rm">true</param>
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<param id="require_container">true</param>
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<param id="container_monitor">true</param>
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<param id="docker_set_user"></param>
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<!-- InteractiveTools do need real hostnames or URLs to work - simply specifying IPs will not work.
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If you develop interactive tools on your 'localhost' and don't have a proper domain name
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you need to tell all Docker containers a hostname where Galaxy is running.
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This can be done via the add-host parameter during the `docker run` command.
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'localhost' here is an arbitrary hostname that matches the IP address of your
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Galaxy host. Make sure this hostname ('localhost') is also set in your galaxy.yml file, e.g.
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`galaxy_infrastructure_url: http://localhost:8080`.
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-->
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<param id="docker_run_extra_arguments">--add-host localhost:host-gateway</param>
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</destination>
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<destination id="docker_dispatch" runner="dynamic">
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<param id="type">docker_dispatch</param>
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<param id="docker_destination_id">docker_local</param>
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<param id="default_destination_id">local</param>
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</destination>
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</destinations>
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</job_conf>
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