""" Test lib/galaxy/visualization/plugins/plugin. """ from galaxy.app_unittest_utils import galaxy_mock from galaxy.util import clean_multiline_string from galaxy.visualization.plugins import ( plugin as vis_plugin, resource_parser, utils as vis_utils, ) from . import VisualizationsBase_TestCase class TestVisualizationsPlugin(VisualizationsBase_TestCase): plugin_class = vis_plugin.VisualizationPlugin def test_default_init(self): """ A plugin with no context passed in should have sane defaults. """ vis_dir = galaxy_mock.MockDir( { "config": {"vis1.xml": ""}, "static": {}, "templates": {}, } ) plugin = self.plugin_class(galaxy_mock.MockApp(), vis_dir.root_path, "myvis", {}) assert plugin.name == "myvis" assert plugin.path == vis_dir.root_path assert plugin.config == {} assert plugin.base_url == "myvis" # template assert plugin.serves_templates assert plugin.template_path == vis_dir.root_path + "/templates" assert plugin.template_lookup.__class__.__name__ == "TemplateLookup" # resource parser assert isinstance(plugin.resource_parser, resource_parser.ResourceParser) def test_init_with_context(self): """ A plugin with context passed in should use those in it's set up. """ vis_dir = galaxy_mock.MockDir( { "config": {"vis1.xml": ""}, "static": {}, "templates": {}, } ) context = dict(base_url="u/wot/m8", template_cache_dir="template_cache", additional_template_paths=["one"]) plugin = self.plugin_class(galaxy_mock.MockApp(), vis_dir.root_path, "myvis", {}, context=context) assert plugin.base_url == "u/wot/m8/myvis" assert plugin.template_lookup.__class__.__name__ == "TemplateLookup" def test_init_without_static_or_templates(self): """ A plugin that has neither template or static directory should serve neither. """ vis_dir = galaxy_mock.MockDir({"config": {"vis1.xml": ""}}) plugin = self.plugin_class(galaxy_mock.MockApp(), vis_dir.root_path, "myvis", dict()) assert not plugin.serves_templates # not sure what this would do, but... def test_build_render_vars_default(self): """ Render vars passed to render should default properly. """ # well, that's kind of a lot of typing to say nothing new config = dict(name="Cat Fancy Magazine's Genomic Visualization") plugin = self.plugin_class(galaxy_mock.MockApp(), "", "myvis", config) render_vars = plugin._build_render_vars(config) assert render_vars["visualization_name"] == plugin.name assert render_vars["visualization_display_name"] == plugin.config["name"] assert render_vars["title"] is None assert render_vars["saved_visualization"] is None assert render_vars["visualization_id"] is None assert render_vars["query"] == {} assert isinstance(render_vars["config"], vis_utils.OpenObject) assert render_vars["config"].__dict__ == {} def test_build_config(self): """ """ plugin_config: dict = dict() plugin = self.plugin_class(galaxy_mock.MockApp(), "", "myvis", plugin_config) config = plugin._build_config({}) assert isinstance(config, vis_utils.OpenObject) assert config.__dict__ == {} # existing should flow through plugin_config = dict() plugin = self.plugin_class(galaxy_mock.MockApp(), "", "myvis", plugin_config) existing_config = dict(wat=1) config = plugin._build_config(existing_config) assert config.wat == 1 # unlisted/non-param kwargs should NOT overwrite existing plugin_config = dict() plugin = self.plugin_class(galaxy_mock.MockApp(), "", "myvis", plugin_config) existing_config = dict(wat=1) config = plugin._build_config(existing_config, wat=2) assert config.wat == 1 # listed/param kwargs *should* overwrite existing plugin_config = dict( params=dict( wat={"csv": False, "required": False, "type": "int", "var_name_in_template": "wot"}, ) ) plugin = self.plugin_class(galaxy_mock.MockApp(), "", "myvis", plugin_config) existing_config = dict(wat=1) # send as string like a query would - should be parsed config = plugin._build_config(existing_config, wat="2") assert config.wat == 2 def test_render(self): """ """ # use the python in a template to test for variables that should be there # TODO: gotta be a better way testing_template = clean_multiline_string( """\ <% found_all = True should_have = [ title, visualization_name, visualization_display_name, visualization_id, saved_visualization, query, config, embedded, vars ] for var in should_have: try: var = str( var ) except NameError as name_err: found_all = False break %> ${ found_all } """ ) mock_app_dir = galaxy_mock.MockDir({"cache": {}, "template.mako": testing_template}) mock_app = galaxy_mock.MockApp(root=mock_app_dir.root_path) plugin = self.plugin_class(mock_app, "", "myvis", {"name": "Vlad News Bears"}) # somewhat easier to set this up by hand plugin.config["entry_point"] = {"file": "template.mako"} plugin.template_path = mock_app_dir.root_path plugin.template_lookup = plugin._build_template_lookup(mock_app_dir.root_path) response = plugin.render(trans=galaxy_mock.MockTrans(app=mock_app)) assert isinstance(response, str) assert response.strip() == "True" # ----------------------------------------------------------------------------- # TODO: config parser tests (in separate file)