#This is a sample file distributed with Galaxy that enables tools #to use a directory of nib genome files for use with codingSnps. You will #need to supply these files and then create a codingSnps.loc file #similar to this one (store it in this directory) that points to #the directories in which those files are stored. The codingSnps.loc #file has this format (white space characters are TAB characters): # # # #So, for example, if your codingSnps.loc began like this: # #hg18 /afs/bx.psu.edu/depot/data/genome/hg18/ # #then your /afs/bx.psu.edu/depot/data/genome/hg18/ directory #would need to contain the following 2bit file: # # #-rw-r--r-- 1 g2data g2data 807604784 Dec 8 13:21 hg18.2bit #Your codingSnps.loc file should include an entry per line for #each file you have stored that you want to be available. Note that #your files should all have the extension '2bit'. hg18 /afs/bx.psu.edu/depot/data/genome/hg18