import json import os import socket import subprocess import sys import tempfile import time # insert *this* galaxy before all others on sys.path sys.path.insert(1, os.path.abspath(os.path.join(os.path.dirname(__file__), os.pardir, os.pardir))) from galaxy.tool_util.deps import docker_util def parse_ports(container_name, connection_configuration): while True: ports_command = docker_util.build_docker_simple_command("port", container_name=container_name, **connection_configuration) with tempfile.TemporaryFile(prefix="docker_port_") as stdout_file: exit_code = subprocess.call(ports_command, shell=True, stdout=stdout_file, preexec_fn=os.setpgrp) if exit_code == 0: stdout_file.seek(0) ports_raw = stdout_file.read().decode('utf-8') return ports_raw def main(): with open("container_config.json", "r") as f: container_config = json.load(f) container_type = container_config["container_type"] container_name = container_config["container_name"] connection_configuration = container_config["connection_configuration"] if container_type != "docker": raise Exception("Monitoring container type [%s], not yet implemented." % container_type) ports_raw = None for i in range(10): try: ports_raw = parse_ports(container_name, connection_configuration) if ports_raw is not None: try: host_ip = socket.gethostbyname(socket.gethostname()) except Exception: # doesn't work on OS X host_ip = None with open("container_runtime.json", "w") as f: ports = docker_util.parse_port_text(ports_raw) if host_ip is not None: for key in ports: if ports[key]['host'] == '0.0.0.0': ports[key]['host'] = host_ip json.dump(ports, f) break else: raise Exception("Failed to recover ports...") except Exception as e: with open("container_monitor_exception.txt", "a") as f: f.write(str(e)) time.sleep(i * 2) if __name__ == "__main__": main()