 Nicola Soranzo
|
e950579bf2
|
Replace deprecated xml.etree.ElementTree.Element.getiterator() with iter()
|
2018-09-17 11:00:08 +01:00 |
|
|
Nicola Soranzo
|
14259b11d9
|
Python3: finish first pass on whole codebase
|
2017-12-14 12:01:01 +00:00 |
|
|
Nicola Soranzo
|
9b4de72ca6
|
Fix all E722 errors and ignore E741
Introduced in flake8 3.5.0
Fix import order.
|
2017-10-24 11:29:09 +01:00 |
|
|
Nicola Soranzo
|
d1bc98dfcb
|
Python3: fix remaining print statements
Remove some debugging prints.
Fix import order.
Consolidate exception logging in ToolShed database migrations.
|
2017-10-12 18:34:29 +01:00 |
|
|
Nicola Soranzo
|
a353b2e88f
|
Fix E127 errors introduced by previous commit
using:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E127 .
```
|
2017-08-17 11:35:39 +01:00 |
|
|
Nicola Soranzo
|
21b44bf348
|
Fix all E201 and E202 style errors
using the following command:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E201,E202 .
```
|
2017-08-17 11:35:39 +01:00 |
|
|
Nicola Soranzo
|
1d17a29c79
|
Fixes for pycodestyle 2.2.0
|
2016-11-15 16:56:50 +00:00 |
|
|
Nicola Soranzo
|
93348e7199
|
Fix the remaining 1334 flake8 errors in scripts/ . Close #391.
|
2016-02-18 15:45:15 +00:00 |
|
|
Dannon Baker
|
dba89dff83
|
Convert everything from elementtree to stdlib xml module.
|
2015-01-29 16:10:56 -05:00 |
|
|
Dannon Baker
|
ba6114ca3e
|
Fix create_all_fasta_loc to work when inspect_dir is not set.
|
2012-09-18 20:49:29 -04:00 |
|
|
Kelly Vincent
|
a0a1f44c32
|
Added a sample loc file listing all fasta files and a script to generate the file given a base genome directory.
|
2010-11-08 00:43:02 -05:00 |
|