 Jeremy Goecks
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2a4012e03d
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Final JS reorg to rename and move files so that all files follow standard conventions.
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2012-08-21 17:08:35 -04:00 |
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Jeremy Goecks
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66d1892364
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More JS file reorganization: (a) move IE and rgenetics into their own directories; (b) move additional external libraries to libs.
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2012-08-21 16:54:19 -04:00 |
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Jeremy Goecks
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44d37d7eee
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Move most jQuery files into own libs directory.
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2012-08-21 15:52:50 -04:00 |
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Jeremy Goecks
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a3d8452df5
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JavaScript cleanup: (a) create backbone lib in scripts/lib and use for backbone libraries; (b) clean up history.js; (c) pack scripts.
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2012-08-21 14:27:18 -04:00 |
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Jeremy Goecks
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97ffa48a2b
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Add bigwig/bigbed support to Circster. Pack scripts.
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2012-07-24 14:28:08 -04:00 |
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Jeremy Goecks
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15e2cc247d
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Rename paramamonster as sweepster and use bootstrap tooltips in sweepster.
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2012-07-24 14:21:40 -04:00 |
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James Taylor
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3118446f4e
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tooltips: Replace all uses of tipsy with bootstrap style (with the same modifications for placement we previously used for tipsy). This will allow us to start using popovers
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2012-07-20 16:28:23 -04:00 |
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James Taylor
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96f6ea514b
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Add support for bootstrap style tabs, use tabs in edit attributes form
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2012-07-20 14:53:30 -04:00 |
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Jeremy Goecks
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55d0b2b751
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Fix Trackster bug that was erroneously fetching reference data. Pack script.
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2012-07-15 19:18:26 -04:00 |
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Jeremy Goecks
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40a85af02f
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Use same colors for all tracks in parameter space viz.
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2012-07-12 19:05:48 -04:00 |
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Jeremy Goecks
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94927ee10a
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Pack script.
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2012-07-12 15:53:32 -04:00 |
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Jeremy Goecks
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efc17f5f5f
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Render all tracks in Circster using track preferences.
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2012-07-12 13:21:16 -04:00 |
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Jeremy Goecks
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aa4f9ae4e2
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Small viz tweaks.
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2012-07-11 13:19:23 -04:00 |
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Jeremy Goecks
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9894424833
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Add icon to set mode in paramamonster. Move chevron-expand icon from tracks CSS to base CSS.
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2012-07-10 11:31:41 -04:00 |
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Jeremy Goecks
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ca89711e1b
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Visualization framework enhancements: (a) support for unpacking complete genome/trackster visualizations and (b) Circster view now uses genome visualizations rather than individual datasets as model.
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2012-07-09 09:45:34 -04:00 |
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Jeremy Goecks
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d337f612a7
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Trackster bug fixes.
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2012-07-06 16:05:15 -04:00 |
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Jeremy Goecks
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389ca4df36
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Add introductory help text for paramamonster.
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2012-07-05 11:26:24 -04:00 |
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Jeremy Goecks
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5571ce52ea
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Make bookmarks available in shared Trackster visualizations.
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2012-07-05 09:31:19 -04:00 |
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Jeremy Goecks
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05d06eb46a
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Small fixes for 8fd408407f7e.
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2012-07-03 11:49:10 -04:00 |
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Jeremy Goecks
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f4d0e5b8f2
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Bug fixes and enhancements for paramamonster.
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2012-07-03 11:20:10 -04:00 |
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Jeremy Goecks
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4550023b2d
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Fix Trackster bug and remove debugging code. Pack scripts.
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2012-07-02 09:02:58 -04:00 |
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Jeremy Goecks
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3b08d37b98
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Enhancements to enable paramamonster to be used via accessible/published visualizations. Pack scripts.
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2012-07-01 22:04:40 -04:00 |
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Jeremy Goecks
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f8f06c3706
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Visualization infrastructure: (a) Backbone-ify cache and data managers; (b) push parameter value sampling code into Tool objects. Pack scripts.
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2012-06-07 16:47:06 -04:00 |
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Jeremy Goecks
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cc9381d436
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Foundation for parameter sweeping visualization.
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2012-06-05 17:10:23 -04:00 |
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Jeremy Goecks
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5ba3cb6553
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Place all JavaScript visualization code under static/scripts/viz directory.
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2012-06-04 12:26:52 -04:00 |
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Jeremy Goecks
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6572730fdd
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Visualization: (a) rename circos viz 'circster' and (b) foundational work for circster and backbone-visualization integration. Also pack scripts.
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2012-05-28 12:10:04 -04:00 |
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Jeremy Goecks
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97650ce691
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Partial implementation of Circos visualization using D3.
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2012-05-25 15:13:25 -04:00 |
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Jeremy Goecks
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54edaf8eaa
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Trackster: explicitly set tile height to avoid unneeded whitespace. Pack scripts.
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2012-05-22 12:37:51 -04:00 |
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Jeremy Goecks
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5a0cf3c753
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Fix Trackster bug when fetching more tile data. Pack script.
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2012-05-16 17:27:53 -04:00 |
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Jeremy Goecks
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ee5a7d391b
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Fix bug in Trackster tile management. Pack script.
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2012-05-15 12:09:32 -04:00 |
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Jeremy Goecks
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9c9e728a5b
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Fix display bugs associated with c5da9bd8bbfc. Pack script.
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2012-05-08 17:26:14 -04:00 |
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Jeremy Goecks
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c976d4d280
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Add support for server-state based jQuery deferreds and use for resetting data URL when running tools in Trackster. Pack script.
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2012-04-24 12:17:01 -04:00 |
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Dannon Baker
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c7dccc457b
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Pack scripts.
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2012-04-20 11:21:50 -04:00 |
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Jeremy Goecks
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eff9f81957
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Trackster: better handling of resizing and navigation. Pack script.
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2012-04-19 16:33:29 -04:00 |
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Jeremy Goecks
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940b2f19d6
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Trackster: use strand coloring for FeatureTracks.
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2012-04-18 10:07:15 -04:00 |
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Dannon Baker
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58e6931479
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Pack scripts.
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2012-04-17 15:04:52 -04:00 |
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Jeremy Goecks
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b052963357
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Trackster: (a) fix bug in setting up browser router and (b) use events to notify router that view navigation has occurred.
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2012-04-17 14:37:49 -04:00 |
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Jeremy Goecks
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c296e286d1
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Do not use template for tool panel label as it is overkill.
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2012-04-16 21:49:05 -04:00 |
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Jeremy Goecks
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bd927abf41
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Use hash as location in Trackster.
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2012-04-16 10:18:25 -04:00 |
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Jeremy Goecks
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03c9ed55d0
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Change name of directory with backbone code to mvc.
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2012-04-12 14:29:36 -04:00 |
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Jeremy Goecks
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c644dba9e8
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Change handlebars directory name to templates.
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2012-04-12 14:21:35 -04:00 |
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Jeremy Goecks
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d0861b9e0e
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Basic support for dynamically displaying tool forms.
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2012-04-12 14:18:44 -04:00 |
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Jeremy Goecks
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29de5a0a7a
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Add Backbone-relational library; this is used for managing complex object/collection relationships.
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2012-04-11 10:31:18 -04:00 |
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Jeremy Goecks
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5b2cda4a55
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Create object to store Galaxy paths for use in JavaScript.
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2012-04-10 19:06:24 -04:00 |
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Daniel Blankenberg
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59f8dd9a89
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Fix for not showing hidden tools in tool panel.
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2012-04-09 14:26:11 -04:00 |
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Jeremy Goecks
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05f1470d9e
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Fix bugs in data fetching for tracks created via tools.
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2012-04-06 11:46:56 -04:00 |
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Jeremy Goecks
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fd8c815d2f
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Create ui.js for generic UI Backbone functionality and add models & views to display icon menus. Use new functionality for visualization menu.
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2012-04-05 15:55:47 -04:00 |
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Jeremy Goecks
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9676494356
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Pack scripts.
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2012-04-04 21:45:24 -04:00 |
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Jeremy Goecks
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8692f5a2e9
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Handle tool labels outside sections.
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2012-04-03 17:10:55 -04:00 |
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Jeremy Goecks
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f7fa916f60
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Prettify tool section show/hide using sliding.
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2012-04-03 16:00:17 -04:00 |
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