opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-09-24 16:30:27 +08:00
Code Issues Packages Projects Releases Wiki Activity
21,461 Commits 69 Branches 243 Tags
efe84751a7bf84b2297df7b77b514b8425fe7c70
Commit Graph
403 Commits
Author SHA1 Message Date
carlfeberhard f5fbe1c502 Client: remove older compiled backbone/backbone.js, update scatterplot and charts for same; Visualizations: fix visualization-model url; Scatterplot: fix title bug and Galaxy var 2016-01-21 13:38:12 -05:00
guerler 339ad57f3f Cleanup Masthead and Scratchbook 
Cleanup Masthead and Scratchbook
 2015-12-30 16:31:59 -05:00
Greg Von Kuster 946438ceba Merge branch 'dev' of https://github.com/galaxyproject/galaxy into dev 2015-12-15 07:31:43 -05:00
Greg Von Kuster e505a4f612 Add the CSG Viewer visualization plugin 
based on conversations here:
https://github.com/galaxyproject/galaxy/issues/1191#issuecomment-162553926
 2015-12-07 10:32:32 -05:00
guerler 4dc134d43b Merge branch 'dev' of git://github.com/galaxyproject/galaxy into run_workflow_form_004 2015-12-05 18:29:18 -05:00
guerler a8a4480d5c Fix dataset matching 2015-12-03 22:03:09 -05:00
guerler 368da171f5 Call onbeforeunload before hiding iframe through display() 
Validated message
 2015-11-23 11:12:03 -05:00
guerler 7717659c78 Allow resizing of regular multi-select boxes 
Remove event handler

Add mouse leave event handler

Improve visibility and accessibility

Fix tag name

Style compromise

Repack charts
 2015-11-04 02:16:45 -05:00
guerler 2e21e027b0 Insert promises 
Revision

Revise deferred class to use promises

Update charts

Fix comment

Use resolve and reject properly

Fix comments

Fix comments

Fix comments

Fix comment

Improve naming/comments

Remove unnecessary queue handler

Fix naming
 2015-11-02 12:59:16 -05:00
carlfeberhard fd3cadc371 Merge pull request #378 from eteriSokhoyan/dev 
graph visualization added
 2015-10-06 09:58:41 -04:00
Carl Eberhard 2c2f49bf8e Visualizations, trackster: allow the user to add the dataset launched from as a new track in an existing trackster visualization; add utils/query-string-parsing.js for pulling query params from the query string 2015-07-29 13:57:34 -04:00
Dannon Baker 79562cf8d2 Merge branch 'master' into dev 2015-07-01 14:29:13 -04:00
guerler 8b7a455b01 Disable custome tooltips for histograms 2015-06-30 13:46:12 -04:00
Eteri d4fba96231 graph visualization added 2015-06-24 15:28:42 +02:00
John Chilton 884e824d72 Merge remote-tracking branch 'vavrusa/table-datatype' into dev. 
Conflicts:
	lib/galaxy/datatypes/tabular.py
 2015-06-03 10:52:42 -04:00
guerler cc1f56a118 Fix load order of require and d3 2015-05-27 11:18:04 -04:00
Nicola Soranzo 48023ed374 Remove outdated sentence. 2015-05-15 12:45:16 +01:00
Nate Coraor a85eadfb74 Merge pull request #243 from carlfeberhard/vis.remove-template 
Visualizations registry: switch to entry_point config definition for …
 2015-05-08 10:26:29 -04:00
Carl Eberhard 11b2fbcb3b Visualizations registry: switch to entry_point config definition for built-in visualizations 2015-05-07 16:04:25 -04:00
Martin Cech d28ea45556 Merge branch 'release_15.05' into dev 
Conflicts:
	config/plugins/visualizations/common/templates/script_entry_point.mako
 2015-05-07 13:09:24 -04:00
John Chilton a15a2bd2b2 Fix Python 2.6 incompat in script_entry_point.mako. 2015-05-06 14:06:16 -04:00
Marek Vavrusa bc8bdadca8 datatypes: extracted TabularData superclass from Tabular, CSV subclass 2015-04-30 17:20:32 +02:00
Carl Eberhard ed36e625bb Visualizations registry: refactor the relationship between plugins, the visualization controller, rendering, and rendering saved visualizations, minor fixes; Extend testing; Scatterplot: fix baseUrl resolution when used in own window 2015-04-28 15:41:01 -04:00
Carl Eberhard d14aba2408 Visualizations registry: test script entry point; minor cleanup 2015-04-24 16:53:30 -04:00
Carl Eberhard c4053f1427 Visualizations registry: add script_entry_point.mako and late_javascripts to visualization_base.mako 2015-04-24 13:07:55 -04:00
Carl Eberhard 2fe38db10b Visualizations registry: *actually* correct the default title in visualization_base.mako 2015-04-24 12:57:27 -04:00
Carl Eberhard 385b4e71d6 Visualizations registry: split plugin classes: interactive environments, script entry, static file entry; correct default title in visualization_base.mako 2015-04-24 12:51:47 -04:00
yhoogstrate b29ea767d9 Update scatterplot-display.js 2015-04-07 15:51:55 +02:00
yhoogstrate fc51b85d2c Update scatterplot-edit.js 
automatically generated by grunt
 2015-04-07 15:50:30 +02:00
yhoogstrate af8ddb14a3 ScatterPlot No API connection for nested www_root 
ScatterPlot makes use of a hardcoded API url which is incorrect for certain server configuratoins. Currently these servers need to be manually configured to link to the correct API URL. This patch creates the correct URL from the parental variable parent.galaxy_config.root and returns "/" if this variable can not be found. More visualisations suffer from this bug and have to be patched as well.
 2015-04-07 14:59:29 +02:00
Carl Eberhard 4e5218f4dc Charts: fix script tag order to prevent new version of Backbone loading as AMD; UI, Histories: remove debug statement 2015-03-16 10:48:52 -04:00
guerler 5bee11df4c Charts: Add data point labels to all nvd3 charts (without this gene expression analysis using scatter plots is not very useful) 2015-02-28 12:12:10 -05:00
guerler e6399874e8 Charts: Fix missing data message 2015-02-24 19:41:30 -05:00
guerler e2f5e9e326 Charts: Rebuild and update charts 2015-02-24 19:08:36 -05:00
Carl Eberhard 8a79dfe99e UI, multi-history: minor fixes, tabindeces, cleanup; Scatterplot: refactor mako and fix missing figure tag; Client build, styles: add jstree to cleaned files 2015-02-16 11:43:22 -05:00
Aysam Guerler 3ffcc2448c Charts: Fix error message 2015-02-11 20:56:10 -05:00
Aysam Guerler 7eec63204d Charts: Repack scripts 2015-02-11 20:26:46 -05:00
Carl Eberhard 2b8fca4a03 Visualizations, scatterplot: update handlebars since server runtime was updated 2015-02-09 11:02:31 -05:00
Aysam Guerler 68d9ea0fad Ui: Fix class name 2015-02-06 11:23:19 -05:00
Aysam Guerler 836b3bb913 Ui: Revise portlet margins 2015-02-06 11:05:23 -05:00
Aysam Guerler c8aece99eb Workflow: Add style for workflow tool form 2015-02-05 22:25:22 -05:00
Carl Eberhard ed8b7bd9ec Plugins, Scatterplot: fix library imports to use proper path after ui.js breakup 2015-01-23 12:50:21 -05:00
Aysam Guerler b709d7c061 Update to_html function for text tool, generalize text fields, remove trailing tabs 2015-01-21 11:20:02 -05:00
Aysam Guerler 0057365b06 Charts: Update scroll handler 2015-01-15 01:52:17 -05:00
Aysam Guerler 25100850c8 Charts: Prevent scrolling while zooming, add info text, fix styles 2015-01-15 01:40:39 -05:00
Aysam Guerler c8f123fa2f Charts: Avoid cursor replacement in label field 2015-01-14 11:08:14 -05:00
Aysam Guerler adc2d60bed ToolForm/Workflow: Add post job action forms, enable custom tool form sections 2015-01-13 01:09:03 -05:00
Aysam Guerler 0795557583 Ui: Minor style fix, Charts: Repack scripts 2014-12-10 10:51:37 -05:00
Carl Eberhard 612f3be1cc Client build: modularize pagination plugin from ui.js 2014-12-08 15:04:47 -05:00
Carl Eberhard 3274d882bc Client build: begin modularizing ui.js by extracting peekControl/peek-column-selector plugin, use UMD pattern, rename to peek-column-selector, extract less rules to their own file; Plugins, scatterplot: remove require and rework to use the new module 2014-12-08 14:47:48 -05:00