guerler
4976945ab0
Fix icon sizes
2016-03-15 17:21:21 -04:00
Dannon Baker
4fd5df6d58
Rebuild client, bundles had unresolved conflicts committed previously.
2016-03-10 09:27:21 -05:00
carlfeberhard
d9fc71510a
(merge conflicts)
2016-03-08 12:39:24 -05:00
John Chilton
36d85e81ee
Merge pull request #1843 from dannon/click_workflow_overview
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Workflow editor overview click navigation
2016-03-08 09:04:27 -05:00
Dannon Baker
4cf9064358
Merge, rebuild client.
2016-03-07 17:55:04 -05:00
carlfeberhard
c15e5db2ec
(manually merge conflicts)
2016-03-07 16:15:38 -05:00
Dannon Baker
0036785769
Merge, rebuild.
2016-03-04 16:29:13 -05:00
Dannon Baker
370ea10f75
Use real routes for tours, and make them actually work. Now it's
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possible to open the tour index in a new tab, etc., instead of just
using javascript craziness.
2016-03-04 16:23:58 -05:00
carlfeberhard
22148c26c1
(merge conflicts)
2016-03-04 08:14:50 -05:00
John Chilton
e14e8a074c
Allow rerun of datasets new yet queued by job manager.
2016-03-04 09:14:29 +00:00
Dannon Baker
8dd24734e3
Minor followup to 1846
2016-03-03 12:25:06 -05:00
Dannon Baker
1220e2e978
Prevent tours from kicking off within iframes, causing duplicate tour step display.
2016-03-03 08:31:17 -05:00
Dannon Baker
f2043a2142
rebuild client
2016-03-02 16:46:08 -05:00
Dannon Baker
517be33229
Block the extra click that happens just after drag-end; we don't want to move/recenter an additional time.
2016-03-02 16:03:09 -05:00
Dannon Baker
3241fe3cad
Click-to-center functionality for the workflow editor overview box.
2016-03-02 15:11:09 -05:00
John Chilton
eb2005e7a2
Merge pull request #1764 from guerler/fix_check_and_update_000
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Use visit inputs for check_and_update_param_values
2016-03-01 12:40:16 -05:00
guerler
bc33f9b182
Fix upload tool routing
2016-02-29 22:05:29 -05:00
Nicola Soranzo
93069676e6
Merge branch 'release_16.01' into dev
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Conflicts:
static/style/blue/base.css
2016-02-25 17:54:16 +00:00
guerler
d3b343acab
Use visit_inputs for check_and_update_param_values
2016-02-24 21:26:30 -05:00
Nate Coraor
1f530b45b3
Merge branch 'release_16.01' into dev
2016-02-24 10:58:54 -05:00
carlfeberhard
7855e0009d
(merge conflicts)
2016-02-24 09:22:31 -05:00
carlfeberhard
3f15d5af21
UI, histories: rework update system to check contents based on update times of contents and only stop checking when history has no more running jobs
2016-02-24 09:20:24 -05:00
Nicola Soranzo
390d3b7eb7
Merge branch 'release_16.01' into dev
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Conflicts:
static/scripts/bundled/analysis.bundled.js.map
static/scripts/bundled/libs.bundled.js
static/scripts/bundled/libs.bundled.js.map
2016-02-23 18:13:22 +00:00
John Chilton
dbab6f5b97
Workaround for #1739 - fixing up subworkflow inut connections.
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Do the same relaxed thing we do for inputs of type 'input' as we do for outputs of this type. Someday we should have better tracking, but such a change is probably not wise for a release branch.
2016-02-22 21:46:03 +00:00
carlfeberhard
040fb8185b
Merge pull request #1751 from martenson/libraries-refactor
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various libraries refactoring and bugfixes
2016-02-19 11:57:10 -05:00
guerler
89759a00c1
Remove DummyDataset
2016-02-18 17:41:41 -05:00
guerler
7ea4668ff7
Remove former populate_state
2016-02-18 17:41:38 -05:00
guerler
580895af1d
Revision
2016-02-18 17:40:30 -05:00
guerler
7b8f675172
Place logo into config, add masthead test cases
2016-02-18 17:40:28 -05:00
Nicola Soranzo
a0537762f2
Merge branch 'release_16.01' into dev
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Conflicts:
static/scripts/bundled/analysis.bundled.js
static/scripts/bundled/analysis.bundled.js.map
static/scripts/bundled/libs.bundled.js.map
2016-02-18 19:52:23 +00:00
carlfeberhard
84de6b4ed3
Fix target or window.location when importing histories from display.mako (shared with me->view) to allow for iframes; silence popup-menu.js when menu is closed due to location change
2016-02-17 14:41:08 -05:00
Martin Cech
b50cf13379
refactor library dataset permissions API to use role manager
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fix a bug in making dataset private (when you called it multiple
times it would always add a new datasetpermission)
various refactorings of JS and py
2016-02-17 11:59:00 -05:00
Martin Cech
e28f329008
add selects for dataset genome build and extension
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minor stylistic fix for column width
2016-02-17 11:58:44 -05:00
Martin Cech
535b689cbc
style the toolbar of dataset view templates
2016-02-17 11:57:22 -05:00
Martin Cech
8f8da0105e
fix router returning from dataset permissions back to dataset
2016-02-17 11:56:08 -05:00
Martin Cech
fcca59c70f
refactor; mainly the templates
2016-02-17 11:56:08 -05:00
Martin Cech
0ae21aeb62
fix returning from versioned dataset view back to the latest
2016-02-17 11:56:07 -05:00
Martin Cech
22e84e4814
repack client after merge conflicts
2016-02-09 13:31:30 -05:00
Martin Cech
db9c0b89ab
Merge release_16.01 into dev
2016-02-09 13:23:27 -05:00
Martin Cech
776180ab80
show all available information for current library and the opened folder
2016-02-09 10:24:02 -05:00
Martin Cech
8acc7ebc04
repack client
2016-02-08 12:02:18 -05:00
Martin Cech
308402235f
Merge release_16.01 into dev
2016-02-08 11:54:01 -05:00
Martin Cech
054c04f490
Merge pull request #1695 from natefoo/help-message-css
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[16.01] Update help text rST note/warning/error box styling for change in div class from toolHelpBody to ui-form-help.
2016-02-08 10:41:54 -05:00
Nate Coraor
5e77af198a
Update help text rST note/warning/error box styling for change in div
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class from toolHelpBody to ui-form-help.
2016-02-08 09:47:07 -05:00
Martin Cech
7867f3e083
accept json as input for setting permissions;
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fix inconsistency by leveraging role_manager
2016-02-04 15:51:57 -05:00
Dannon Baker
ab5f153617
Clientside routing for tour kickoff, swapping from ?tour_id=foo approach.
2016-02-04 10:23:18 -05:00
Dannon Baker
33ebeb801d
Use backbone routing for a tours URL, since there's no serverside endpoint.
2016-02-04 10:21:49 -05:00
Dannon Baker
61f168d34b
A slightly different check for Galaxy object definition that doesn't assume a window-attached Galaxy context, only a parent. Minor cleanup.
2016-02-04 10:19:26 -05:00
John Chilton
d93f095c7f
Merge remote-tracking branch 'jmchilton/param_argument_fix' into dev
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Conflicts:
static/scripts/bundled/analysis.bundled.js
static/scripts/bundled/analysis.bundled.js.map
static/scripts/bundled/libs.bundled.js
static/scripts/bundled/libs.bundled.js.map
2016-02-03 14:52:36 +00:00
Nate Coraor
246870c459
Merge branch 'release_16.01' into dev
2016-02-03 13:11:07 -05:00
guerler