Commit Graph
52 Commits
Author SHA1 Message Date
Nicola Soranzo dda6feb391 Remove redundant license info from package READMEs
The license is already specified in `setup.cfg` , which is the
canonical place.
This will simplify the transition to the MIT license.
2022-09-09 17:20:24 +01:00
Michael R. Crusoe 59ac92c1c8 mark galaxy packages as containing typing information 2022-07-26 23:27:36 +01:00
Nicola Soranzo 922263089d Modernise build of galaxy-web-framework package
Also:
- Add missing directory to `MANIFEST.in`
2022-06-09 23:48:35 +01:00
Nicola Soranzo 73bf57e9a0 Remove unused and unnecessary code
- `PROJECT_OWNER`, `PROJECT_USERAME`, `RAW_CONTENT_URL` and `_version_re` are unused.
- `:changelog:` hyperlink target is unnecessary.
- `test_suite` and `tests_require` are deprecated since setuptools v41.5.0
2022-06-09 22:55:07 +01:00
Nicola Soranzo e9b2262dd3 Move mypy configuration to `mypy.ini`
So packages can use `setup.cfg` to replace `setup.py` .
2022-06-08 10:35:18 +01:00
Nicola Soranzo aeef3318a2 Use setuptools custom package discovery instead of explicit listing 2022-06-06 23:48:37 +01:00
Nicola Soranzo f2a42ba67e Run mypy on all packages' files
Also:
- mypy fixes.
- Use `with` statement to open/close files.
2022-05-30 22:38:55 +01:00
John Chilton 800d49c467 Short term storage infrastructure. 2022-04-13 09:52:51 -04:00
Nicola Soranzo 0c80836c34 Upgrade syntax to Python 3.7
using `ack --type=python -f | grep -v '^tools/' | xargs pyupgrade --py37-plus`

Also more refactoring of Python files in `packages/` .
2022-03-14 14:57:43 +00:00
Nicola Soranzo 6057338cbd Format files in packages/ with black
with:

```
find packages/ -name '*.py' | xargs black
```

The `packages/` directory is currently excluded in the `[tool.black]`
section of `pyproject.toml` because black follows symlinks.
2022-02-03 14:07:52 +00:00
Dannon Baker 623a5e165a Apply black formatting.
Apply isort.
2022-02-03 07:42:20 -05:00
mvdbeek 0af72e56b2 Update version to 22.05.dev0 2022-02-01 11:10:56 +01:00
Nicola Soranzo b9efe433e6 Fix pydantic requirements 2022-01-06 19:21:17 +00:00
Nicola Soranzo 0bdc93a7cc Drop support for Python 3.6, add Python 3.10 2021-12-08 08:14:10 +00:00
Michael R. Crusoe 7819fdc7a6 tighten type ignores 2021-11-23 13:12:07 +01:00
Nicola Soranzo 155f3731c3 Remove leftover six requirement from 3 packages 2021-11-10 02:34:47 +01:00
Sergey Golitsynskiy e691ab866b Update SQLAlchemy to 1.4.25 2021-09-23 11:29:38 -04:00
mvdbeek 5332eb246a Update version to 22.01.dev0 2021-09-20 19:53:11 +02:00
Sergey Golitsynskiy 003dfc48ae Update SQLAlchmey to 1.4.20 2021-07-04 13:18:13 -04:00
Sergey Golitsynskiy 314e00e643 Update SQLAlchemy to 1.4.19 2021-06-23 11:19:58 -04:00
Sergey Golitsynskiy b3551fec8c Update SQLAlchemy to 1.4.18 2021-06-11 18:53:07 -04:00
Sergey Golitsynskiy 94ce70aa8b Update SQLAlchemy to 1.4.17 2021-06-03 12:22:54 -04:00
Sergey Golitsynskiy 9cb78f7c3d Update SA pin to 1.4.15; update requirements files 2021-05-18 19:02:40 -04:00
Sergey GolitsynskiyandNicola Soranzo 0740e175db Update SQLAlchemy pin <2 in packages/web_framework/requirements.txt
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
2021-05-18 19:02:40 -04:00
Sergey Golitsynskiy 490655ae97 Update SA pin to 4.7; update requirements files
Also unpin requirement in packages
2021-05-18 19:00:55 -04:00
Sergey Golitsynskiy a9868971a8 Update SQLAlchemy pin for packages to >=1.4.5 2021-05-18 19:00:55 -04:00
mvdbeek 07fb59937e Update version to 21.09.dev0 2021-05-05 21:48:01 +02:00
Sergey Golitsynskiy 2f0a024915 Pin sqlalchemy in package requirements files 2021-03-16 13:55:21 -04:00
John Chilton 7ef579b96c Fix web framework requests for pydantic 1.8 not working. 2021-03-01 12:59:05 -05:00
John Chilton 1fd4bce673 Refactor legacy grids - tool shed webapp shouldn't depend on reports webapp. 2020-12-31 15:18:57 -05:00
John Chilton 51f8a6f16b mypy typing checking for galaxy-web-framework 2020-12-28 23:55:00 -05:00
mvdbeek 389a72e73f Add pydantic to web_framework requirements 2020-12-22 11:18:31 +01:00
Nicola Soranzo e40e5aef7e Upgrade syntax using pyupgrade --py36-plus 2020-11-18 16:16:46 +00:00
Nicola Soranzo e96c96eb79 Merge branch 'release_20.09' into dev 2020-10-19 17:48:30 +01:00
Nicola Soranzo a3b954126d Add *requirements.txt files to source packages 2020-10-19 10:32:05 +01:00
mvdbeek 6ac956b57c Merge branch 'release_20.09' into dev 2020-10-17 10:43:51 +02:00
John Chilton 80e1af9bc3 Starting work on web-framework 20.9.1 2020-10-15 12:15:30 -04:00
John Chilton 74eca3c953 Version 20.9.0 of web-framework (tag galaxy-web-framework-20.9.0). 2020-10-15 12:15:17 -04:00
John Chilton 472395821e Prep the next release of galaxy-web-framework. 2020-10-15 12:15:00 -04:00
Nicola Soranzo 9d74bba7fb Drop support for retired Python 3.5
Upgrade syntax using `pyupgrade --py36-plus` .

Manually drop several `six` imports.

Also:
- Remove broken pr_cache in scripts/bootstrap_history.py
- Fix broken prefix removal in lib/galaxy/tool_util/deps/mulled/mulled_build.py
2020-10-07 11:52:13 +01:00
Dannon Baker c007e03d2a Merge remote-tracking branch 'upstream/release_20.05' into dev 2020-07-14 12:12:20 -04:00
John Chilton 1616d21b0a Tweak requirements for recent changes to package structure. 2020-07-14 09:17:41 -04:00
John Chilton 0ea20422e0 Modify packages to allow test requirements (for responses). 2020-07-06 18:49:04 -04:00
John Chilton 1e09b7775a Move test/unit/web -> test/unit/web_framework 2020-07-06 11:22:28 -04:00
John ChiltonandNicola Soranzo c124fcf1be Apply suggestions from code review
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
2020-07-06 11:20:47 -04:00
Björn Grüning d0b125540f add babel 2020-07-06 10:20:58 +02:00
John Chilton ef6b199eb8 Fixes for requirements of galaxy-web-framework. 2020-07-05 23:03:35 -04:00
John Chilton cb64d545bb Stub test for galaxy-web package to get it under CI. 2020-07-05 23:03:34 -04:00
John Chilton 479863f5fe Starting work on web-framework 20.5.1 2020-07-04 10:17:12 -04:00
John Chilton 6740d3ab73 Version 20.5.0 of web-framework (tag galaxy-web-framework-20.5.0). 2020-07-04 10:16:28 -04:00