Martin Cech
d54136101d
Merge
2014-02-20 16:24:56 -05:00
Martin Cech
9c45e67d88
bugfix: reverted showing of terms_url
2014-02-20 16:21:45 -05:00
Carl Eberhard
8fd3ccb584
Remove debugging statement
2014-02-20 15:59:22 -05:00
Carl Eberhard
00b02bc69d
Fix to persistance between page loads of tags, annotations shown/hidden in history panel
2014-02-20 14:03:21 -05:00
Carl Eberhard
2a28ef005a
History published/shared/display as slug: use annotated-history-panel, search open by default, preserve whitespace in annotations, replace import button with 'switch to' if owned by user viewing; Annotated History Panel: panel view of history that shows datasets as a table with additional dataset info in a left cell
2014-02-20 11:34:19 -05:00
Carl Eberhard
e3c2f5bee5
History panel: remove anonymous template
2014-02-19 13:54:55 -05:00
Aysam Guerler
b1b88f9189
Grids: Fix negative page numbers
2014-02-19 13:20:42 -05:00
Carl Eberhard
d54087d47a
history/view: clean up, replace import link with window.location; UI mode button: several fixes, clean up, docs; Remove original_view from controllers/history (and templates)
2014-02-19 12:32:06 -05:00
Carl Eberhard
463d46c239
Fix TypeDef error in history panel by adding sanity check for tags/annotations being open (Thanks, Aysam)
2014-02-18 16:40:23 -05:00
Carl Eberhard
73e087c9a9
History panel: begin process of breaking up panel into more focused prototypes
2014-02-18 15:11:48 -05:00
Aysam Guerler
f96e3eee5a
Grids: Fix negative page numbers
2014-02-19 13:16:36 -05:00
Aysam Guerler
73e74f74c8
Upload: Hide former upload tool
2014-02-18 14:57:08 -05:00
Aysam Guerler
7df616bd2e
Upload: Load user details on show
2014-02-18 13:21:03 -05:00
Aysam Guerler
768376f960
Upload: Make upload available to anonymous users
2014-02-18 13:13:04 -05:00
Martin Cech
350e9c6d87
data libraries: visual tweaks, removal of buttons (now navigate through clicking on names)
2014-02-17 17:17:36 -05:00
Aysam Guerler
c445bf5016
Upload: Use find from underscore
2014-02-17 12:58:39 -05:00
Carl Eberhard
9e32945972
UI: add peek-based column selection control; Scatterplot: use peek-based control for selection of x, y, id axes
2014-02-17 12:11:04 -05:00
Aysam Guerler
7951cec806
Config: Add ‘datatypes_disable_auto’ option to universe configuration
2014-02-15 02:06:57 -05:00
Aysam Guerler
934db851e7
Datatypes: Add datatype description to xml, Upload: Load description from xml
2014-02-15 00:06:32 -05:00
Carl Eberhard
ecf9b060c4
Remove scatterplot from legacy visualization framework (it will no longer appear if you haven't enabled visualization_plugins_directory in your universe_wsgi.ini); clean up; pack scripts
2014-02-14 10:47:38 -05:00
Carl Eberhard
5d01f6393c
UI: add pagination jquery plugin able to handle known/unknown data totals; Scatterplot: use that plugin for pagination, add class for highlighted data points
2014-02-14 10:17:56 -05:00
Aysam Guerler
ae32b8879a
Ui: Apply naming convention
2014-02-13 04:21:06 -05:00
Aysam Guerler
be91b72f1d
Ui: Move ui classes into a separate directory
2014-02-13 04:12:41 -05:00
Aysam Guerler
74dd88051e
Upload: Fix select removal
2014-02-13 03:14:26 -05:00
Aysam Guerler
aebdfa82b4
Upload: Add select2 selection fields, add select2 backbone wrapper
2014-02-13 02:37:10 -05:00
John Chilton
d2ee7135a9
Outline galaxy.tools.js and load in tool_form.mako.
...
Migrated the logic out of tool_form.mako that I could readily test, the rest of the custom javascript in tool_form.mako should likewise be migrated I assume.
Holds a lot of logic downstream in my work related to running tools in parallel across many datasets and over dataset collections - https://github.com/jmchilton/galaxy-central/blob/collections_1/static/scripts/galaxy.tools.js .
2014-02-10 21:34:42 -06:00
Carl Eberhard
90a624f81a
History panel: enable multi-select, decrease loading indicator fade time, correct disabled icon-btn color
2014-02-10 09:52:40 -05:00
Aysam Guerler
c69f259f12
Upload: Fixes for FF
2014-02-08 01:02:50 -05:00
Aysam Guerler
73fcab9094
Upload: Fix progress bar in FF
2014-02-08 00:31:29 -05:00
Aysam Guerler
4d7472e245
Upload: Add error handler to ftp file api controller, remove timeout for extension info popup
2014-02-07 23:15:43 -05:00
Aysam Guerler
5ebc427003
Upload: Fix style for FF
2014-02-07 22:39:51 -05:00
Aysam Guerler
619d31c992
Upload: Remove console output
2014-02-07 19:41:28 -05:00
Aysam Guerler
e7eef5f2bc
Upload: Only add ftp file path if available
2014-02-07 19:05:36 -05:00
Aysam Guerler
db5cd65a70
Upload: Add ftp support, separate modules, Ui: Add popovers, Grids: Fix search icon
2014-02-07 18:47:25 -05:00
Jeremy Goecks
f55fe47d9b
Circster: (a) fix bad math that led to incorrect track positioning and (b) make gap between tracks a configurable option.
2014-02-07 15:04:42 -05:00
Jeremy Goecks
2cdbce62e9
Backbone config settings view: hide modal before updating model.
2014-02-07 15:02:49 -05:00
Carl Eberhard
e9c9258b19
merge
2014-02-06 16:55:28 -05:00
Carl Eberhard
11ee6432c2
Move misc_info trimming to server side (causing UI flash on updates); Correctly handle wide misc info scrolling
2014-02-06 16:55:05 -05:00
Jeremy Goecks
e71c0063d5
(1) Update Backbone Config objects and (2) add config options to Circster.
2014-02-06 15:41:05 -05:00
Jeremy Goecks
20477c4bde
Merge next-stable into default.
2014-02-05 16:22:45 -05:00
Jeremy Goecks
c5a5d0347b
Fix bugs that prevented saving visualizations from Circster. To do this, introduced a mixin for custom toJSON methods. Pack scripts.
2014-02-05 16:22:17 -05:00
Carl Eberhard
bee0303a69
Visualizations API: properly return visualization model id from update; Visualizations MVC: bring setConfig into line with Backbone API
2014-02-05 12:36:11 -05:00
Aysam Guerler
b01da4d396
Upload: Align button style to other panel header buttons
2014-02-05 00:46:38 -05:00
Aysam Guerler
597f509d63
Upload: Fix popup destruction
2014-02-04 15:24:35 -05:00
Aysam Guerler
aee87e773e
Upload: Change icon
2014-02-04 15:02:46 -05:00
Aysam Guerler
96536ecf27
Upload: Add file extension descriptions
2014-02-04 14:53:26 -05:00
Aysam Guerler
38521a0bb5
Grids: Fix grids with preserved states
2014-02-03 16:21:12 -05:00
Aysam Guerler
7e6d6b76c1
Grids: Add search button
2014-01-31 09:02:33 -05:00
Aysam Guerler
1178f16d5d
Grids: Remove url generation from js template
2014-01-31 08:24:39 -05:00
Aysam Guerler
2af8fc1297
Grids: Fix pages
2014-01-31 07:52:49 -05:00
Martin Cech