Jeremy Goecks
e4ff2da11b
Refactor tabular chunked display into Backbone and use for displaying tabular data.
2013-02-04 12:37:32 -05:00
Carl Eberhard
9d6d64684b
history panel: ensure deleted or purged datasets are considered ready to the updater; pack scripts
2013-02-04 12:14:23 -05:00
James Taylor
260228e8b1
Add some missing files
2013-02-03 23:22:16 -05:00
James Taylor
56a81d0134
Support for using Sentry for error logging. If sentry_dsn is set in
...
universe_wsgi.ini, then:
- A middleware will be installed that send thrown exceptions to sentry
- All logging messages of level WARN and above will be sent to sentry
- All pages extending base/base_panels will have javascript errors
captured and sent to sentry
2013-02-02 17:56:55 -05:00
Jeremy Goecks
517fb61e20
Fixes for 149f0fc and pack scripts.
2013-01-30 10:54:15 -05:00
Carl Eberhard
ba73ae7c33
history panel: log responseText of history-model update errors; pack scripts
2013-01-28 16:22:47 -05:00
Jeremy Goecks
409ba63a4f
Grid framework refactoring to increase speed and ease of debugging: (1) create and use Backbone object for grid; (2) move grid javascript to its own file; (3) remove webapp parameter; (4) augment search box style so that search button does not wrap. Pack scripts.
2013-01-28 14:02:25 -05:00
Daniel Blankenberg
979c1a6a16
Pack scripts.
2013-01-07 11:45:30 -05:00
Carl Eberhard
fc4ca70d27
history panel: panel was not showing deleted datasets when a dataset was purged (even when set to 'include deleted datasets') - fix by using purge_async; history panel: fix history-options menu checkbox with new font awesome class format; pack scripts
2013-01-04 10:57:18 -05:00
Carl Eberhard
0eafc2e21a
history_contents, index & show: add force_history_refresh key/value; history panel: fix broken addHdas when used via the updater, add force_history_refresh to reload the history panel when an hda/tool requests it; pack scripts
2013-01-02 16:30:24 -05:00
Carl Eberhard
52fb3b17b5
pack scripts
2012-12-20 12:35:09 -05:00
Carl Eberhard
eec1010689
history_panel: do not re-render panel when an hda is deleted
2012-12-19 17:08:21 -05:00
Carl Eberhard
a869f9a348
pack scripts
2012-12-19 15:49:03 -05:00
Carl Eberhard
b15c727274
merge staging:140b1d164818 to central
2012-12-18 15:02:46 -05:00
Carl Eberhard
f91a65baa6
pack scripts
2012-12-18 14:51:26 -05:00
Jeremy Goecks
435079f6cd
Use slideUp rather than hide for pretty hiding of HDAs when removed.
2012-12-18 12:02:56 -05:00
Jeremy Goecks
f55edeb9f5
Implement asynchronous deletion for HDAs. Pack scripts.
2012-12-18 10:40:43 -05:00
Carl Eberhard
9664fa077a
pack_scripts
2012-12-07 14:36:44 -05:00
Carl Eberhard
7a409d6ef0
clean up; pack
2012-12-07 14:00:51 -05:00
Carl Eberhard
b52e6d4113
ui: adding PopupMenu view as alternate to make_popup_menu and allow changing option text, adding/removing options, and adding checkmarks for togglable options; index.mako: use PopupMenu for history-options-button; history panel: use alternate_history.mako to add 'collapse all', 'Include hidden datasets'(toggle), 'Include deleted datasets'(toggle) to history-options-button; alternate_history.mako: include better system for debugging js when changing source directly is problematic (main/test); pack_scripts;
2012-12-07 13:56:53 -05:00
Carl Eberhard
7d79c06925
history panel: fix to trackster links when dbkey is empty; pack_scripts
2012-12-06 17:34:18 -05:00
Carl Eberhard
feddd2bf9f
history panel: fix download popup for uploaded files with meta files (bam) by moving url rendering from initialize to render; pack scripts
2012-12-06 16:33:18 -05:00
Carl Eberhard
50bf56a5d4
history panel: comment out console statements; controllers/visualization: remove non-2.5 compliant 'with' statement
2012-11-29 17:43:15 -05:00
Carl Eberhard
58ee5ce033
LazyDataLoader.js: now handles NaN/Infinity/-Infinity as null, allows overriding jQuery's datatype converters; controllers/root: added echo_json for debugging/testing
2012-11-29 13:32:44 -05:00
Carl Eberhard
14d09d9dec
scatterplot: add header discovery from first dataset line; fix animation; better hover info; fix column selection; pack scripts
2012-11-28 10:45:01 -05:00
Carl Eberhard
0a65b4947a
scatterplot: renaming/re-organization pass; layout change to vertical tabs and inclusion of chart under tabs; pack scripts
2012-11-27 11:19:32 -05:00
Carl Eberhard
96a72cda1c
history panel: moved refresh into 'History' header bar. Moved 'Collapse Expanded Datasets', 'Show/Hide Deleted Datasets', and 'Show/Hide Hidden Datasets' into 'History' gear menu. Removed gear menu from current history. Packed scripts.
2012-11-21 13:28:33 -05:00
Carl Eberhard
d48bbd4b45
pack scripts
2012-11-20 15:32:40 -05:00
Carl Eberhard
ce007f07f7
history panel: noop on ajax error fetching history updates when interrupted by iframe refresh.
2012-11-19 12:18:10 -05:00
Dannon Baker
a270da52fe
Packed scripts.
2012-11-16 09:42:05 -05:00
Carl Eberhard
cf01e9ef7b
history panel: fix to packed template name
2012-11-15 13:43:54 -05:00
Carl Eberhard
6c86d20d5c
pack scripts
2012-11-15 13:11:56 -05:00
Carl Eberhard
0f78b5ccb6
pack scripts
2012-11-15 12:04:17 -05:00
Carl Eberhard
8d1cab3775
pack scripts
2012-11-15 11:25:58 -05:00
Carl Eberhard
9d95495bde
(alt)history: subclass on for_editing flag: now hda-edit.js, hda-base.js; split hda and history templates; compile_templates.py: don't stop removal loop for error on single file; pack_scripts;
2012-11-09 15:38:51 -05:00
Carl Eberhard
f0cdf264bc
(alt)history: standardize custom broadcasted events, localize all strings; base-mvc, GalaxyLocalization: add (commented-out) code to store non-localized strings that are attempting to be localized; pack scripts;
2012-11-09 11:01:48 -05:00
Carl Eberhard
b06a75beee
pack scripts
2012-11-08 16:15:03 -05:00
Carl Eberhard
5729893c57
pack scripts
2012-11-08 14:43:26 -05:00
Carl Eberhard
7b8c252e4d
(alt)history: move show_deleted, show_hidden to the client. galaxy.util: added string_as_bool_or_none which parses True/False/None values from controller args.
2012-11-08 14:42:26 -05:00
Carl Eberhard
48d58a8e58
pack scripts
2012-11-06 14:09:40 -05:00
Jeremy Goecks
aa2d69a4e3
Pack scripts.
2012-11-04 21:44:29 -05:00
Jeremy Goecks
3d491f63c1
Pack scripts.
2012-11-01 13:27:07 -04:00
Carl Eberhard
8e6ebda032
pack scripts
2012-10-30 16:42:11 -04:00
Jeremy Goecks
7b19a84ba8
UI framework enhancements: (a) upgrade to jQuery UI 1.9.1; (b) remove version information from jQuery UI file names; (c) add generic jQueryUI search+select combobox widget; (d) use combobox widget for choosing dbkey in Trackster visualizations. Also pack scripts.
2012-10-30 09:07:29 -04:00
Dannon Baker
63125fcdd1
Pack workflow editor javascript to be compatible with changes in pull request #76
2012-10-25 10:52:26 -07:00
mgehring
135b148196
Fixed data retrieval and color display for chromatin interactions in trackster.
2012-10-24 11:51:18 -04:00
Jeremy Goecks
2607d1b3c0
Pack scripts.
2012-10-20 16:40:38 -04:00
Jeremy Goecks
9c953192be
Add backbone model, collection, and view for configuration settings. Pack scripts.
2012-10-19 11:55:49 -04:00
Carl Eberhard
7c9e899645
scatterplot.js: incorporate utils/LazyDataLoader.js; pack scripts
2012-10-15 12:41:32 -04:00
Jeremy Goecks
ef2c8f54ec
Viz client-side framework: generalize add_datasets function and change name to select_datasets, general code cleanup, and packed scripts.
2012-10-12 17:22:51 -04:00
Jeremy Goecks