Commit Graph
135 Commits
Author SHA1 Message Date
John Chilton df6c604774 Starting work on tool-util 20.5.0.dev2 2020-03-14 09:34:02 -04:00
John Chilton a50878613d Prep release for tool-util 20.5.0.dev0 2020-03-14 09:30:24 -04:00
John Chilton 0940b1ec26 Starting work on tool-util 20.1.0.dev6 2020-01-29 14:08:18 -05:00
Dannon 8e16fcb4cc Merge pull request #9233 from dannon/external-auth-login-refinement
[20.01] External auth login refinement
2020-01-28 13:22:55 -05:00
John Chilton fdfdcc50b4 Starting work on tool-util 20.1.0.dev5 2020-01-27 09:41:11 -05:00
Dannon Baker 0be9fd5e56 Fix test bit array length... 2020-01-23 10:28:46 -05:00
Dannon Baker 4ddb038f3f Drop authnz package; leave coupled with webapp 2020-01-23 09:54:40 -05:00
John Chilton 531ad72032 Starting work on tool-util 20.1.0.dev4 2020-01-17 12:19:48 -05:00
John Chilton c0e37c9e63 Starting work on tool-util 20.1.0.dev3 2020-01-16 09:54:28 -05:00
John Chilton 4db5f180f8 Starting work on tool-util 20.1.0.dev2 2020-01-15 13:19:14 -05:00
John Chilton 49ec5187f5 Starting work on tool-util 20.1.0.dev1 2020-01-13 23:05:59 -05:00
John Chilton 7890be518c Starting work on util 20.1.0.dev1 2020-01-13 23:03:48 -05:00
John Chilton 13fbcbee5e Update tool-util requirements (now depends a new galaxy-util). 2020-01-13 22:55:16 -05:00
John Chilton 0bebd6c037 Prep next release galaxy-util, galaxy-tool-util (20.1.0-dev0). 2020-01-13 22:53:18 -05:00
mvdbeek f20049b3c8 Merge branch 'release_19.09' into release_20.01 2019-12-30 10:00:01 +01:00
John Chilton 2e91dd121f Starting work on tool-util 19.9.2 2019-12-28 16:43:30 -05:00
John Chilton d6703f54f6 Version 19.9.1 of tool-util (tag galaxy-tool-util-19.9.1). 2019-12-28 16:42:25 -05:00
Nicola Soranzo 7f9d96c4d4 Merge branch 'release_19.09' into dev 2019-12-18 22:58:57 +00:00
John Chilton f687e98d62 More fixes for publishing decomposed packages.
- On screen instructions are wrong when publishing about pushing.
- Tried actually using container stuff in tool-util and realized we're missing a dependency.
- Process gets too far along if twine is not installed.
2019-12-16 22:39:33 -05:00
John Chilton e26ef552c7 Starting work on tool-util 19.9.1 2019-12-16 21:22:52 -05:00
John Chilton 7252a228b6 Version 19.9.0 of tool-util (tag galaxy-tool-util-19.9.0). 2019-12-16 21:22:32 -05:00
John Chilton 7a31f81940 Starting work on containers 19.9.1 2019-12-16 21:22:13 -05:00
John Chilton 93c1f071f9 Version 19.9.0 of containers (tag galaxy-containers-19.9.0). 2019-12-16 21:21:54 -05:00
John Chilton 7a75299f70 Starting work on job-metrics 19.9.1 2019-12-16 21:19:43 -05:00
John Chilton a61a499fd8 Version 19.9.0 of job-metrics (tag galaxy-job-metrics-19.9.0). 2019-12-16 21:19:20 -05:00
John Chilton ca57f8c113 Starting work on objectstore 19.9.1 2019-12-16 21:07:26 -05:00
John Chilton 6b820e7cda Version 19.9.0 of objectstore (tag galaxy-objectstore-19.9.0). 2019-12-16 20:59:30 -05:00
Marius van den Beek aaec85e134 Merge pull request #7936 from simonbray/cli-tools
CLI tools for installing/testing Docker and Singularity containers
2019-11-29 09:28:30 +01:00
Martin Cech 67dc4ab4ec Merge branch 'release_19.09' into dev 2019-11-26 10:22:30 -05:00
John Chilton 806237a83b Fix packaging scripts for non-dev releases. 2019-11-21 09:43:47 +01:00
John Chilton 073624557c Starting work on util 19.9.1 2019-11-21 09:43:16 +01:00
John Chilton 13d61a7286 Version 19.9.0 of util (tag galaxy-util-19.9.0). 2019-11-21 09:39:59 +01:00
John Chilton 885202cf1c Packages - fix commit_version to handle multiple dev releases. 2019-11-21 09:38:00 +01:00
John Chilton d9ad4f90c7 Remove capsule feature from tool shed. 2019-11-12 20:56:12 -05:00
John Chilton fd5679ad55 New packages for Galaxy tests. 2019-11-12 09:05:08 -05:00
John Chilton 559b664b07 Refactor tool_shed webapp out of Galaxy. 2019-11-11 12:32:19 -05:00
John Chilton 3278d1df89 Refactor galaxy install migrate into galaxy. 2019-11-11 00:28:25 -05:00
John Chilton a18c992974 Refactor installed_repository_metadata_manager into galaxy. 2019-11-11 00:27:32 -05:00
John Chilton 44cc9735aa Refactor tool_shed.metadata.metadata_generator into Galaxy. 2019-11-11 00:27:31 -05:00
John Chilton 898191b591 Refacotr repository_dependency_manager into galaxy. 2019-11-11 00:27:31 -05:00
John Chilton 6cce30fc80 Refactor galaxy_install.datatypes into galaxy. 2019-11-11 00:27:30 -05:00
John Chilton 70b5845505 Refactor galaxy_install.tools into galaxy. 2019-11-11 00:27:30 -05:00
John Chilton aa8f32a671 Refactor tool_shed.galaxy_install.tool_dependencies into galaxy.
TODO:
2019-11-11 00:27:29 -05:00
John Chilton 6fd2fac89c Rework various tool shed imports head of big refactor. 2019-11-10 22:37:49 -05:00
John Chilton 1341b80716 Fix up galaxy-tool-util package structure for #7936. 2019-10-31 09:58:10 -04:00
John Chilton fde0cd72cf Fix galaxy-data requirements.
No longer pinning sqlalchemy to 1.2.
2019-10-31 09:29:08 -04:00
Simon Bray aa71023cda add jinja2 to packages/tool_util/requirements.txt 2019-10-31 11:10:22 +01:00
mvdbeek 5e9dd557d5 Add basic unit test for lint_inputs
This could of course be extended much more.
2019-08-04 11:58:39 +02:00
Nicola Soranzo bbf17354c5 Fix broken link in `galaxy-app` package
Broken in commit 42cf61fd36 .
2019-07-19 02:36:36 +01:00
Martin Cech 00600e4006 Merge pull request #8298 from jmchilton/selenium_package
Create galaxy-selenium package.
2019-07-18 15:17:42 -04:00