Commit Graph
509 Commits
Author SHA1 Message Date
James Taylor de9ff560e1 style: removing history.css and tool_menu.css, both are empty. 2013-08-31 10:36:17 -04:00
Jeremy Goecks 55bf776946 Pack scripts. 2013-08-26 17:38:00 -04:00
Jeremy Goecks 22284541df Move workflows JavaScript code to its own file for modularity and bundling purposes. Pack scripts. 2013-08-26 10:32:07 -04:00
Jeremy Goecks 043173f254 Fixes for 8ed926e: (1) enable labels to be displayed outside of sections in tool panel and(b) revert class for label divs. Pack script. 2013-08-22 18:13:57 -04:00
Jeremy Goecks 6e5607c32d Enhancements to Tool client-server interactions: (a) use DictifiableMixin to dictify toolbox, tools, and tool inputs + outputs; (b) integrate code from visual analytics module with tool/parameter code base and remove VA module; (c) harmonize class names for tool panel on server and client side; (d) update client-side tool panel code and trackster code to work with server-side enhancements. Pack scripts. 2013-08-21 13:01:53 -04:00
Carl Eberhard 547d825c81 JS libraries: update jStorage to 4.4 2013-08-21 08:47:11 -07:00
Aysam Guerler 5a05a52775 Unify parameter and url access in front end 2013-08-20 18:51:47 -04:00
Dannon Baker 07af5ff0ed Update select2 to 3.4.2. Pack scripts. Build styles. 2013-08-15 17:01:59 -04:00
Carl Eberhard 4e5ef5a390 History panel: more fixes 2013-08-15 14:03:40 -04:00
Carl Eberhard 92ff78f599 History panel: fix for backbone update 2013-08-15 13:48:23 -04:00
Jeremy Goecks c8287321a3 Tool panel refactoring: (a) make client-side code compatible with newest Backbone and Backbone-relational libraries; (b) use mixin rather than a base model on client; (c) add spacing between methods of server-side definition. Pack scripts. 2013-08-14 15:20:23 -04:00
Jeremy Goecks b92bb2b801 Update Backbone to v1.0.0 and Backbone-relational to v0.8.5 2013-08-14 15:15:13 -04:00
Carl Eberhard 44b6375cfa UI: change load order of user-related JS; pack scripts 2013-08-14 13:09:51 -04:00
Aysam Guerler f413895aaa Remove new_browser.mako and instead use js-template and api function 2013-08-08 01:15:49 -04:00
Jeremy Goecks c77be881b9 Remove JSON2 library because it is no longer needed: all modern web browsers natively support JSON.stringify and JSON.parse 2013-08-07 16:02:23 -04:00
Carl Eberhard 3e2b6f3441 Handlebars.runtime.js: update to 1.0.0, recompile templates, pack (devs need to update their handlebars.compilers to 1.0.12) 2013-08-07 15:12:35 -04:00
Carl Eberhard 8a1364b045 Fix centering of scatterplot; pack scripts 2013-08-06 15:04:05 -04:00
Aysam Guerler ac4169b48a Pack JS-scripts 2013-08-05 17:04:50 -04:00
Aysam Guerler bc5b2f5953 Unification and refactoring of front end templating for js-visualizations (trackster, circster, etc.) 2013-08-05 17:02:05 -04:00
Jeremy Goecks f81c33b3c3 Fix bug in Pages' link creation and pack scripts. 2013-07-31 13:00:23 -04:00
Carl Eberhard e54aa39eee History panel: disable (w/ message) display button for uploading files 2013-07-23 09:32:22 -04:00
Aysam Guerler a4c1284ce1 Scratchbook: Update, fix tooltip, re-factor code 2013-07-09 13:32:58 -04:00
Jeremy Goecks b1d3a2475d Galaxy pages: (a) move JS code out of mako template and into galaxy.pages.js; (b) make WYMEditor work with Chrome and jQuery 1.9+; (c) fix bug that showed meaningless text when inserting a link. Pack scripts. 2013-07-01 12:37:44 -04:00
Carl Eberhard 9b337da8a6 Add new packed scripts 2013-06-24 15:08:23 -04:00
Carl Eberhard 9071ea8463 data providers: add data to factory decorator to allow datasets api to parse query strings into provider settings; datasets API: allow new providers to be used in raw_data; clean up and pack scripts 2013-06-24 14:06:16 -04:00
Jeremy Goecks 1d329e7ff5 Re-add support for dragclickonly event to jquery.event.drag. Pack script. 2013-06-18 15:12:09 -04:00
Jeremy Goecks e7e23d480a Update jQuery library to 1.9.2 and jquery.event.drag/drop to 2.2; add jquery.migrate library because many jQuery plugins rely on deprecated features. Remove live() in favor of click(). Pack scripts and templates. 2013-06-18 10:51:12 -04:00
Jeremy Goecks 3b83ac6cc3 Remove iframe around tools menu. Tranform tools_menu.mako in a library that is used by index.mako to create and display tool panel. Pack scripts. 2013-06-17 16:45:22 -04:00
Carl Eberhard 8a8b234aee galaxy.base.js: Remove console.debug; pack scripts 2013-06-14 14:51:49 -04:00
Jeremy Goecks c45e35596a Automated merge of stable branch 2013-06-12 16:02:42 -04:00
Jeremy Goecks 979c041d65 Trackster performance fix: extend Cache to support any object that can be converted to a String. Use this enhancement to avoid creating Backbone objects, which can be slow. 2013-06-12 16:02:19 -04:00
Carl Eberhard f361621d7a Allow cross-frame popupmenus to use named targets; pack scripts 2013-06-12 10:29:04 -04:00
Jeremy Goecks d6e949b014 Trackster: fix config fallback to defaults. 2013-06-11 16:25:27 -04:00
Jeremy Goecks fd0b0fed84 Trackster: enable feature track post-draw actions to handle display of both coverage and interval data. 2013-06-07 13:05:01 -04:00
Jeremy Goecks 755256aff2 Trackster: for variant track painter, only draw loci in viewing region. 2013-05-22 15:23:15 -04:00
Jeremy Goecks 7d7f04a5b4 Viz framework fixes: (a) add hda_ldda attribute to API dicts of HDAs and LDDAs; (b) remove summary tree from Circster; (c) make Circster compatible with recent change to get HDAs from API. Pack scripts. 2013-05-21 14:37:51 -04:00
Carl Eberhard a13d13d077 Scatterplot: use named data provider, fix encoding of ids; pack scripts 2013-05-21 12:54:21 -04:00
Carl Eberhard 730a15657f Fixes to phyloviz 2013-05-21 11:15:10 -04:00
Jeremy Goecks 2140a14bf0 Trackster: transparency and state fixes for variant painter. 2013-05-20 16:16:03 -04:00
Jeremy Goecks 834cbd6582 Pack script. 2013-05-20 13:48:08 -04:00
Carl Eberhard df1927422c Visualizations framework: allow users to associate custom visualizations with models, datatypes, etc. via an xml configuration file (visualizations_conf.xml) 2013-05-17 14:45:07 -04:00
Daniel Blankenberg 12b858f9cd Make form input auto-focus declarative. 2013-05-08 10:58:52 -04:00
Daniel Blankenberg fb0cd7b304 Pack scripts 2013-05-08 10:45:12 -04:00
Daniel Blankenberg 6c6e08a7ef Fixes for trackster visualizing single sample vcf and for getting colors of non-standard bases. 2013-04-18 15:39:32 -04:00
Daniel Blankenberg 4f620dd979 Auto Focus on first item on forms. 2013-04-18 13:14:14 -04:00
Carl Eberhard 57f8714725 History panel: ensure syncing of history state and hda states by passing hda dicts to get_history_dict; pack scripts 2013-04-17 16:36:01 -04:00
Carl Eberhard 12bdb2aec3 History panel: allow query val for hda_id to scroll specific hda into view, cleanup; browser tests: add download, info, and rerun button tests 2013-04-16 14:03:11 -04:00
Jeremy Goecks f442f2116d Merge in stable branch. 2013-04-12 16:16:17 -04:00
Jeremy Goecks de1a836a73 Fixes for running tools in Trackster. 2013-04-12 16:12:01 -04:00
Carl Eberhard 505684068b history panel: move history options menu code into index.mako, localization pass; pack scripts 2013-04-11 16:48:47 -04:00