anatskiy
b215de947c
renamings and fixes
2016-10-09 21:28:43 +02:00
anatskiy
bf4a1aa1a8
topbar webhooks testing
2016-10-09 21:22:10 +02:00
anatskiy
40bcaaecf5
add one more plugin
2016-10-09 21:19:34 +02:00
anatskiy
eb46e70206
add first webhook
2016-10-09 21:19:20 +02:00
anatskiy
6e66fbeca8
add very basic plugin system (for tools)
2016-10-09 21:19:05 +02:00
Evgeny Anatskiy
d821c2745c
pass trans object into the helper function
2016-10-09 16:32:58 +02:00
guerler
2316075f0c
Merge branch 'dev' into remote_chart_plugins
2016-10-08 14:20:59 -04:00
Nicola Soranzo
a2ee8d10af
Merge branch 'release_16.07' into dev
...
Conflicts:
doc/source/admin/conda_faq.rst
static/maps/mvc/ui/ui-modal.js.map
static/scripts/bundled/libs.bundled.js
static/scripts/bundled/libs.bundled.js.map
static/scripts/mvc/ui/ui-modal.js
2016-10-05 20:34:50 +01:00
Evgeny Anatskiy
2bf0549a37
fix bugs after previous commit
2016-10-05 16:59:16 +02:00
Evgeny Anatskiy
31674ef5b7
Merge branch 'feature/plugin-system' of github.com:bgruening/galaxy into feature/plugin-system
...
# Conflicts:
# client/galaxy/scripts/layout/menu.js
# client/galaxy/scripts/mvc/tool/tool-form.js
# static/maps/layout/menu.js.map
# static/maps/mvc/tool/tool-form.js.map
# static/scripts/bundled/analysis.bundled.js
# static/scripts/bundled/analysis.bundled.js.map
# static/scripts/bundled/libs.bundled.js
# static/scripts/bundled/libs.bundled.js.map
# static/scripts/layout/menu.js
# static/scripts/mvc/tool/tool-form.js
2016-10-05 16:16:27 +02:00
Evgeny Anatskiy
6f109176d1
bug fixes and improvements
2016-10-05 16:11:07 +02:00
Evgeny Anatskiy
3c3819900f
add new entry point for History Panel menu
2016-10-05 16:10:44 +02:00
anatskiy
fce44d257b
- add new entry point (Workflow)
...
- temporarily hide masthead webhook (due to instability)
2016-10-05 16:10:30 +02:00
anatskiy
6e534213e1
- unify webhooks entry point
...
- simlify webhooks code (on load)
- improve code readability
- clean up
2016-10-05 16:10:19 +02:00
anatskiy
482e0b2bff
renamings and fixes
2016-10-05 16:09:55 +02:00
anatskiy
239731d45a
topbar webhooks testing
2016-10-05 16:04:52 +02:00
anatskiy
fecf493ecd
add one more plugin
2016-10-05 15:56:49 +02:00
anatskiy
ac5a0f5a6a
add first webhook
2016-10-05 15:55:55 +02:00
anatskiy
cf1fde577e
add very basic plugin system (for tools)
2016-10-05 15:54:21 +02:00
Evgeny Anatskiy
b98e49f2bc
bug fixes and improvements
2016-10-05 15:33:03 +02:00
guerler
b595cd3f47
Always submit either history_id or new history name through run form
2016-10-04 22:36:16 -04:00
guerler
329ee05251
Hide children elements instead of destroying them upon successful workflow submission
2016-10-04 12:36:52 -04:00
Evgeny Anatskiy
b46d55e30f
add new entry point for History Panel menu
2016-10-04 16:16:04 +02:00
guerler
0b03a800ab
Improve error display robustness for run workflow form
2016-10-03 09:50:48 -04:00
guerler
d5c54907da
Rename step_id to step_index to avoid confusion, fix error message response handling
2016-10-03 09:45:06 -04:00
guerler
ce7cf6cc23
Rename step_id to step_index to avoid confusion
2016-10-03 08:21:45 -04:00
guerler
0f6ad3f414
Use order index to link connected datasets
2016-10-03 08:17:58 -04:00
John Chilton
b106c48b68
Unify build_workflow_run_configs for API and UI approaches to running workflows.
...
No more branches - the method runs top to bottom for each approach. One loop for batching regardless and completely available to all API options. Only call WorkflowRunConfig in one place. Remove duplicate fetching of replacement_params. One call to _normalize_step_parameters.
2016-09-30 22:54:06 -04:00
guerler
4fea03acc9
Use explicit order_index when assigning workflow steps
2016-09-30 17:07:43 -04:00
guerler
67eb2c6530
Use parameters/batch instead of input_params
2016-09-30 13:17:51 -04:00
guerler
e14fe50643
Use order_index instead of step_id
2016-09-30 00:08:38 -04:00
guerler
494d50f52c
Repack client
2016-09-29 23:31:51 -04:00
guerler
46d05ba080
Merge branch 'dev' into remote_chart_plugins
2016-09-29 22:49:23 -04:00
guerler
e34019e528
Improve invocations success message
2016-09-29 03:15:50 -04:00
Dannon Baker
8966b74131
Swap to section row selector
2016-09-27 14:43:06 -04:00
guerler
838fad39a1
Add details to error modal
2016-09-26 04:38:55 -04:00
guerler
5095fc02c4
Remove internal api endpoint, merge into invocations endpoint
2016-09-25 12:45:28 -04:00
Dannon Baker
277d3c3e58
Slight wording tweak.
2016-09-23 13:22:20 -04:00
Dannon Baker
c5a5196717
Change wording to be more clear about how workflow output cleanup works. Also adjust styling so that the rows in the workflow editor box are less smashed together.
2016-09-23 12:33:32 -04:00
guerler
2cf7b8ee15
Fix status handling for ajax requests
2016-09-23 06:36:04 -04:00
guerler
42ebe00c06
Add listener to properly clean up deferred form building processes
2016-09-23 06:16:54 -04:00
carlfeberhard
d7ab1c5cfb
UI, Modal: re-build dom on render
...
Moves templating to render (and updates dom node attributes after)
to reset modal and prevent inline styling and other modifications
to the singleton from persisting between calls to show.
2016-09-22 11:38:10 -04:00
guerler
7a736818a6
Avoid inheritance in tool-form view
...
Avoid inheritance for workflow editor form
Fix test cases
2016-09-21 16:51:45 -04:00
guerler
1ab673a4ed
Fix padding distance
2016-09-21 13:15:24 -04:00
guerler
80b5e5da91
Remove unused portlet footer
2016-09-21 13:15:24 -04:00
guerler
05b1c98896
Add basic step version changes notification
2016-09-21 13:15:23 -04:00
guerler
a537daa9ed
Move run form model builder to workflow data manager
2016-09-21 13:15:22 -04:00
John Chilton
f553d387a4
Merge pull request #2880 from jgoecks/bbi-js3
...
Trackster: Read numerical data directly from bigwig files
2016-09-15 13:03:08 -04:00
guerler
d98a72d58e
Merge branch 'dev' into remote_chart_plugins
2016-09-02 13:25:41 -04:00
guerler
5483e9f5bf
Fix indention for noscratchbook flag
2016-09-02 12:27:54 -04:00
anatskiy