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13 Commits
Author SHA1 Message Date
John Chilton 528497f7c4 Refactor galaxy.web.security into galaxy.security.idencoding. 
I want to be able to use this class in galaxy.model and it doesn't have any dependnecies on "web" stuff so I'd like to move it out of galaxy.model and into galaxy.security. galaxy.model shouldn't have dependencies on galaxy.web (and doesn't after the recent 976f5ad367), so this pre-emptively ensures it doesn't require these dependencies for https://github.com/galaxyproject/galaxy/pull/7367.

This has the benefit of also eliminating any galaxy.web dependencies from the generic test base file (test/base/testcase.py) which has long been a goal of mine as well.

There are places we legimately use ID encoding and decoding for security (i.e. job files API) but for the most part it doesn't provide security for API endpoints and this causes confusion repeatedly, so I've started the process of renaming the contained class SecurityHelper to something I feel makes it clearer this is just about encoding and decoding IDs.
 2019-03-19 14:28:31 -04:00
Nicola Soranzo f4203ca051 Fix errors reported by flake8 3.6.0 
Ignore W504.
 2018-10-24 23:22:19 +01:00
Nate Coraor 44c291bc66 Merge remote-tracking branch 'origin/dev' into ini_to_yaml_config 2018-01-18 12:30:05 -05:00
Nicola Soranzo 14259b11d9 Python3: finish first pass on whole codebase 2017-12-14 12:01:01 +00:00
John Chilton 7bae23e105 yaml_config - update code base for converting galaxy.ini.sample to YAML. 2017-12-06 20:28:20 -05:00
Nicola Soranzo d1bc98dfcb Python3: fix remaining print statements 
Remove some debugging prints.
Fix import order.
Consolidate exception logging in ToolShed database migrations.
 2017-10-12 18:34:29 +01:00
Nicola Soranzo 9b1832abb1 Fix import order for cron/, scripts/ and test/ 2017-09-25 23:44:39 +01:00
Nicola Soranzo a353b2e88f Fix E127 errors introduced by previous commit 
using:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E127 .
```
 2017-08-17 11:35:39 +01:00
Nicola Soranzo 21b44bf348 Fix all E201 and E202 style errors 
using the following command:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E201,E202 .
```
 2017-08-17 11:35:39 +01:00
Nicola Soranzo 1d17a29c79 Fixes for pycodestyle 2.2.0 2016-11-15 16:56:50 +00:00
Dave Bouvier 9f1490cc60 Fix sys.path.insert some more. 2016-04-05 13:55:21 -04:00
Dave Bouvier 9bf3976e8a Fix sys.path.insert 2016-04-05 13:50:51 -04:00
Dave Bouvier 77353902ee Move scripts out of lib/tool_shed. 2016-04-05 13:04:44 -04:00