Commit Graph
2881 Commits
Author SHA1 Message Date
Martin Cech c6f0b0ef67 Merge pull request #187 from martenson/new-logo
[15.05] include new logo in the new release
2015-05-04 09:48:03 -04:00
Carl Eberhard c6adf6e4c2 History panel: side-step creation of mutant collections instead of erroring 2015-05-01 12:05:47 -04:00
Dannon Baker c87c2a90a4 Merge branch 'expand_optionals' of https://github.com/guerler/galaxy into guerler-expand_optionals
Conflicts:
	static/maps/mvc/form/form-section.js.map
	static/scripts/mvc/form/form-section.js
2015-04-30 15:52:35 -04:00
guerler d9b857ee13 Fix typo 2015-04-29 21:25:05 -04:00
guerler 83750b418b Allow fallback to name for missing tool parameter labels 2015-04-29 21:09:48 -04:00
guerler 2f714044c9 Expand optional parameters, disable collapsing 2015-04-29 20:55:23 -04:00
Martin Cech af638403c4 add a margin to the logo picture to match the space in front of text 2015-04-29 15:40:29 -04:00
Martin Cech a0123331fa include new logo in the new release 2015-04-29 14:43:06 -04:00
Martin Cech 357d5f2e44 fix for UI duplication bug reported bo Bjorn
occured when folder contents were re-sorted
2015-04-28 12:37:23 -04:00
guerler 8899453118 Fix empty default values for numeric parameters with min/max 2015-04-25 09:59:34 -04:00
Dannon Baker a2ba53f2c6 Merge pull request #134 from carlfeberhard/collections
Collections
2015-04-20 17:41:58 -04:00
Carl Eberhard 37cc9a0511 (cleanup debug statement) 2015-04-20 10:09:54 -04:00
Carl Eberhard ad29625d04 UI, collection creators: move no valid message into the alert box 2015-04-20 10:02:39 -04:00
Carl Eberhard 0dec475c80 UI, collection creators: minor tweaking 2015-04-17 10:53:26 -04:00
Carl Eberhard 9ada2f6c43 UI, Histories: improve highlighting of current/active content in current history panel 2015-04-16 16:01:23 -04:00
Carl Eberhard a92a719fe5 UI, collection creators: attempt to unify validity/error handling between list and pair creators 2015-04-16 12:33:54 -04:00
Carl Eberhard b2c7344f8f UI, Pair creator: handle invalid selections better, clean up, document; revert history.mako as a test bed 2015-04-15 12:22:12 -04:00
Carl Eberhard bf733670ca UI, Pair creator: initial (sloppy) refactor of pair creator to inherit from list creator 2015-04-14 16:39:18 -04:00
Carl Eberhard f5049a7ca0 UI, List creator: refactor some of the init code, clean up, documentation 2015-04-14 12:18:05 -04:00
Carl Eberhard ef484e648c UI, List creator: move hoverhighlight to its own module 2015-04-14 10:29:22 -04:00
Carl Eberhard b1d3a41a63 UI, List creator: autofocus name, mangle duplicate element names, turn off sorting 2015-04-14 10:23:48 -04:00
Carl Eberhard 951301cbdd UI, Collections: begin refactoring the list of pairs creator into a list collection creator: a subclass for all three (current) collection creators 2015-04-14 09:49:58 -04:00
guerler c40e8f618d Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_validation 2015-04-14 03:01:33 -04:00
James Taylor d323fa0aad Change Emory to Johns Hopkins in sample welcome. 2015-04-13 17:21:52 -04:00
guerler c1bf66b9b0 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_validation
Conflicts:
	lib/galaxy/tools/__init__.py
	static/maps/mvc/form/form-view.js.map
	static/scripts/mvc/form/form-view.js
2015-04-10 19:59:56 -04:00
John Chilton e09fc21e6c Merge pull request #104 from guerler/revise_default_values
Fix default value handling in new tool form
2015-04-10 07:56:14 -05:00
John Chilton 38b06a704b Merge pull request #35 from guerler/tool_form_section_tag
Tool form section tag
2015-04-10 07:52:37 -05:00
guerler 182fac5ad6 Re-insert classic tool form 2015-04-10 01:07:36 -04:00
guerler 3ff5204801 Fix default tool parameter value handling in current form 2015-04-09 22:44:16 -04:00
guerler e625190219 Fix default value handling in new tool form 2015-04-09 22:18:41 -04:00
Carl Eberhard 237c857f8d UI, Histories: respect subtitle dataset hiding switch and prevent bad autohiding of newly added datasets. 2015-04-09 15:03:31 -04:00
Carl Eberhard fb1048bb09 UI, history multipanel: attempt to solve undefined context in underscore.debounce<-checkColumnsInView by removing context binding 2015-04-09 11:05:34 -04:00
guerler 7f479ff32c WorkflowForm: Use is_workflow instead of is_dynamic for workflow editor 2015-04-09 00:28:37 -04:00
guerler e7b7281be7 WorkflowForm: Convert selection arrays to proper strings 2015-04-08 18:47:10 -04:00
guerler 388587de1c Merge branch 'dev' of https://github.com/galaxyproject/galaxy into tool_form_section_tag
Conflicts:
	lib/galaxy/tools/__init__.py
2015-04-06 12:30:17 -04:00
Carl Eberhard b9fc715dd5 Fix url for DatasetAssociationCollection (and expansion of datasets in dataset-choice.js) 2015-04-02 17:16:46 -04:00
Dannon Baker 9257817afd Strip out unused lunr dependency -- a different approach was pursued for tool searching. 2015-04-01 11:41:15 -04:00
Dannon Baker 3a397ee7d3 Merge circster fix from release_15.03 to dev 2015-03-31 17:39:48 -04:00
Carl Eberhard f7669f3cd6 Fix to ba44452: properly scope mod_icon_btn in define not require 2015-03-31 17:05:50 -04:00
guerler 5aa73d0e05 Merge branch 'dev' into tool_form_section_tag
Conflicts:
	lib/galaxy/tools/test.py
2015-03-26 17:04:29 -04:00
guerler 0279d6010a Repack styles, packing fails sometimes 2015-03-25 22:56:09 -04:00
guerler 49f45d3fce Ui: Add top margin to section element 2015-03-25 22:54:54 -04:00
Martin Cech 9496c9e9a4 Merge branch 'release_15.03' into dev
Conflicts:
	static/scripts/mvc/library/library-dataset-view.js
	static/scripts/mvc/library/library-folder-view.js
	static/scripts/mvc/library/library-foldertoolbar-view.js
	static/scripts/mvc/library/library-library-view.js
	static/scripts/mvc/library/library-model.js
	static/scripts/packed
	static/scripts/packed/mvc/library/library-dataset-view.js
	static/scripts/packed/mvc/library/library-folder-view.js
	static/scripts/packed/mvc/library/library-foldertoolbar-view.js
	static/scripts/packed/mvc/library/library-library-view.js
	static/scripts/packed/mvc/library/library-model.js
2015-03-25 16:33:44 -04:00
Martin Cech d5aeb952ce Merge pull request #37 from martenson/release_15.03
[STABLE] fix libraries to work with proxy prefix
2015-03-25 15:23:17 -04:00
John Chilton f11a3a80fe Add file lost in previous merge (b52e562369). 2015-03-25 14:29:38 -04:00
John Chilton b52e562369 Merge remote-tracking branch 'galaxyproject/release_15.03' into dev
Conflicts:
	client/galaxy/scripts/mvc/tools/tools-parameters.js
	static/scripts/mvc/history/history-model.js
	static/scripts/packed
	static/scripts/packed/mvc/history/history-model.js
	static/scripts/packed/mvc/tools/tools-parameters.js
2015-03-25 14:19:54 -04:00
Carl Eberhard 5ace814041 UI, History: fix model setAsCurrent to use galaxy_config.root proxy prefix 2015-03-24 17:03:59 -04:00
Martin Cech 4f53a85ea1 add root prefix to all ajax calls in data libraries 2015-03-24 14:11:41 -04:00
Martin Cech 9eed7ddb56 add root prefix to all library BB model urls 2015-03-24 11:14:11 -04:00
Carl Eberhard ec89d4c7cf Client: fix to base.js to remove Backbone dependency until we stop loading it via script tag (this should fix a trackster load error where backbone was attempting to reload jquery without a shim) 2015-03-23 18:53:40 -04:00