opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-11-05 07:52:07 +08:00
Code Issues Packages Projects Releases Wiki Activity
61,966 Commits 63 Branches 246 Tags
bd56131ebd8eeb043bbc3858f5a4445b779594e7
Commit Graph
1737 Commits
Author SHA1 Message Date
John Davis 84f22bac77 Add db migration documentation to docs 2022-09-27 15:03:12 -04:00
John Davis 5a748bb867 Display 'Config Options' as subheading of 'Galaxy Configuration' 
This corrects a (supposedly) typo that prevented this to be displayed as
a subheading on this page: https://docs.galaxyproject.org/en/master/admin/index.html
 2022-09-27 15:03:03 -04:00
Nicola Soranzo d8986239a1 Merge branch 'release_22.01' into release_22.05 2022-09-09 17:12:29 +01:00
Marius van den BeekandNicola Soranzo b05462a188 Add sbin to PATH 
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2022-09-09 13:06:35 +02:00
mvdbeek 0256b34b34 Include /bin in sample systemd unit path 2022-09-09 12:52:05 +02:00
Nate Coraor 86e42b5483 Update Gravity to 0.13.4 and document setting env vars on dynamic 
handlers.
 2022-09-01 10:40:54 -04:00
Nicola Soranzo 61b6eb1ee9 Fix more `discovered_datasets` typos 2022-08-30 09:57:26 +01:00
mvdbeek a8ff8c62b1 Add missing image 2022-08-22 21:05:59 +02:00
Marius van den Beek c5a2d38c26 Merge pull request #14211 from mvdbeek/22.05_release_notes 
[22.05] 22.05 release notes
 2022-08-22 18:42:24 +02:00
mvdbeek aa577230f8 Drop placeholders 2022-08-22 17:47:37 +02:00
mvdbeek 3d24ef2d91 Add last PR 2022-08-22 17:37:48 +02:00
Marius van den Beek b5ae0ac5d8 Apply Magda's typo and spelling fixes 2022-08-22 17:02:39 +02:00
Marius van den BeekandJohn Davis 0d40797e03 Add Alembic to admin announcement 
Co-authored-by: John Davis <jdavcs@gmail.com>
 2022-08-22 16:34:03 +02:00
Nicola Soranzo 4fcbe80268 Doc fixes 2022-08-19 18:33:20 +01:00
Nicola Soranzo 95326249cd Update application documentation 
with:

```
make -C doc/ updaterst
```
 2022-08-19 17:37:27 +01:00
mvdbeek 2f34e4070c Drop overly verbose changes 2022-08-19 17:11:57 +02:00
mvdbeek 2c12d3a55f Add newer PRs 2022-08-19 16:25:38 +02:00
mvdbeek 18a9a39d97 Write admin announce, add deferred datasets to user announcement 2022-08-19 16:11:41 +02:00
mvdbeek c9a8e4f63e Update PRs 2022-08-19 12:52:11 +02:00
Marius van den BeekM BerntNicola Soranzo
 		4dbb26fc13 Update announce user notes 
Co-authored-by: M Bernt <m.bernt@ufz.de>
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2022-08-19 12:29:25 +02:00
John Davis 3fddd4da3a Add release testing team 2022-08-19 12:29:25 +02:00
Helena Rasche 6261d6af2d add user facing release notes 2022-08-19 12:29:25 +02:00
mvdbeek 857c598065 Update a couple PR titles, strip trailing . from PR titles 2022-08-19 12:29:25 +02:00
mvdbeek ccfe010561 Draft release notes 2022-08-19 12:29:24 +02:00
Marius van den Beek cd94ccb6c5 Merge pull request #14457 from natefoo/log-rotation 
[22.05] Add log rotation options and update logging documentation
 2022-08-17 19:24:07 +02:00
Nicola Soranzo 961472cfff Merge branch 'release_22.01' into release_22.05 2022-08-16 23:25:42 +01:00
Nate Coraor 3522fd3a49 Add log rotation options and update logging documentation 2022-08-15 20:54:02 -04:00
Nicola Soranzo 69defb7a20 Doc fixes 2022-08-15 19:15:02 +01:00
Nicola Soranzo 6a3804ba27 Update application documentation 
with:

```
make -C doc/ updaterst
```
 2022-08-14 18:39:19 +01:00
mvdbeek 728ceebc8a Fix nested archive unzipping on windows 
We need the directory markers in order for the default windows zip
utility to be able to extract the archives. Also requires
https://github.com/evanmiller/mod_zip/commit/51cf45d3e9f51e02224af017b235d1d30fbf28fb
or newer on the mod_zip side.
 2022-08-10 17:33:29 +02:00
Cameron Hyde ffb9b34d89 Update config schema descriptions for tool search 2022-07-28 17:32:32 -05:00
Cameron Hyde 2ca6e7353b Add new config params for tool search 2022-07-28 17:29:58 -05:00
Nicola Soranzo 533a33f935 Merge branch 'release_22.01' into release_22.05 2022-06-27 10:54:51 +01:00
Helena Rasche 6b9658e0e3 Replace mp4s with youtube links 2022-06-27 10:47:45 +02:00
Nate Coraor 270790edc7 Correct standalone pool names 2022-06-15 11:47:51 -04:00
Marius van den Beek 3a18da8523 Merge pull request #14040 from nsoranzo/modernise_package_build 
Modernise build of packages
 2022-06-15 10:48:23 +02:00
Nicola Soranzo 9528dc634d Replace deprecated distutils.version with packaging.version 
Fix https://github.com/galaxyproject/galaxy/issues/12654 .
 2022-06-13 18:47:49 +01:00
Dannon Baker adb02555cb Fix proxy_port arg for interactivetools config sample/doc 2022-06-07 10:40:09 -04:00
Dannon 4644922783 Merge pull request #13655 from mvdbeek/metadata_embed 
Create data_fetch and set_metadata celery tasks
 2022-06-07 10:27:06 -04:00
Nicola Soranzo ed9b009ea7 Merge pull request #14013 from qiagu/doc 
Fix a small error in job doc
 2022-06-04 03:05:48 +02:00
Qiang GuandNicola Soranzo bb72b21ae4 Update doc/source/admin/jobs.md 
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2022-06-03 17:29:12 -07:00
Qiang GuandNicola Soranzo e701a7055d Update doc/source/admin/jobs.md 
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2022-06-03 17:28:57 -07:00
qiagu fa5eee19d7 Fix job doc 2022-06-03 13:08:44 -07:00
Marius van den Beek 61db34aebe Merge pull request #13177 from bernt-matthias/topic/auth-maxretries 
make maximum number of retries for username validation configurable
 2022-05-27 15:58:07 +02:00
mvdbeek 33a3a203f4 Decrease monitor sleep in tests 2022-05-26 12:48:43 +02:00
mvdbeek d845f2a880 Update config file description 2022-05-25 19:46:05 +02:00
Marius van den Beek 7cb3f76c6e Merge pull request #12232 from bernt-matthias/topic/drilldown 
fix `drill_down` parameters
 2022-05-25 15:52:50 +02:00
Marius van den Beek ac510bc8dc Merge pull request #7894 from bernt-matthias/topic/count-pairs-correctly 
Fix docs for `expect_num_outputs` and add `count` attribute for test `output` and `element` tags
 2022-05-25 15:23:10 +02:00
M Bernt d3da6b94f7 Merge branch 'dev' into topic/auth-maxretries 2022-05-21 17:32:31 +02:00
Nicola Soranzo 4bc75e4179 Replace committer name and GitHub username 
Follow up on commit 559b0d1245 .

Also:
- Remove former devteam members from uncredited pull requestor list.
 2022-05-12 16:38:12 +01:00