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20,357 Commits 69 Branches 243 Tags
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Commit Graph
132 Commits
Author SHA1 Message Date
guerler 0a09de5453 Show welcome page with required login, remove iframes 
Reinsert iframe for login

Use iframes
 2015-11-16 14:47:59 -05:00
guerler 76bcfaa0ff Fix log comments 
Use emit

Fix namespace

Fix namespace

Remove empty line

Check if logger exists

Fix comment

Redo

More

Fix yet another log

Fix statements

More fixes

Move emitter
 2015-11-07 00:45:00 -05:00
Dannon Baker 593cb4074b Merge pull request #1018 from guerler/revise_promise_000 
Revise deferred queue, use jQuery promises
 2015-11-03 13:32:00 -05:00
guerler 2e21e027b0 Insert promises 
Revision

Revise deferred class to use promises

Update charts

Fix comment

Use resolve and reject properly

Fix comments

Fix comments

Fix comments

Fix comment

Improve naming/comments

Remove unnecessary queue handler

Fix naming
 2015-11-02 12:59:16 -05:00
carlfeberhard b67601f74c Client logging: move logger assignment into Galaxy object, both Galaxy.user and all LoggableMixins will now respond to debugging, properly localize error messages 2015-10-30 15:58:08 -04:00
carlfeberhard b75150ade7 Client logging: remove 'namespaced', allow 'log' to be added in the standard way (now that browsers are compat with this), simplify interface in the Galaxy object 2015-10-30 10:43:11 -04:00
carlfeberhard d96fc60e1f Client logging: allow focusing on one or more namespaces, add function to more easily namespace loggers 2015-10-29 13:09:28 -04:00
carlfeberhard a9ac9193c1 Client logging: adapt metrics logger for optional debug logging 2015-10-29 12:27:17 -04:00
guerler c70c1aabd8 Fix deferred dom removal 
Remove empty line

Fix comments

Fix log location

Fix comments
 2015-10-27 15:37:39 -04:00
Carl Eberhard b1841e22d9 Client build: do not drop console when compressing, when not compressing do not mangle variable names 2015-09-01 10:55:41 -04:00
Martin Cech f9f763f430 add missing js build 2015-08-25 16:35:31 -04:00
guerler ed171e9519 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into upload_000 
Conflicts:
	static/maps/utils/utils.js.map
	static/scripts/utils/utils.js
	static/style/blue/base.css
 2015-08-17 11:36:49 -04:00
guerler 0c3fdd2d63 Add test cases for uploader, add generic Galaxy environment to qunit 2015-08-17 11:33:03 -04:00
Dannon Baker 63d6c37a39 Rebuild client w/ new options. 2015-08-13 15:23:55 -04:00
guerler c7ad46099c Enable ftp file selection for composite uploads 2015-08-11 11:55:17 -04:00
guerler eaff25b6eb Merge branch 'dev' of https://github.com/galaxyproject/galaxy into upload_000 
Conflicts:
	client/galaxy/scripts/mvc/upload/upload-view.js
	static/maps/mvc/upload/upload-view.js.map
	static/scripts/mvc/upload/upload-view.js
	static/style/blue/base.css
 2015-08-10 11:26:37 -04:00
John Chilton 668e650f52 Merge pull request #526 from carlfeberhard/trackster.existing-browser 
Visualizations, trackster: allow the user to add the dataset launched…
 2015-08-05 20:50:18 +01:00
guerler 8eca23e4b4 Attach success, error handlers for composite uploads, fixes 2015-08-05 05:43:29 -04:00
guerler 8e093847f9 Enable composite data submission 2015-08-05 04:41:18 -04:00
guerler 42c61535d6 Separate upload post function, remove some unnecessary functions 2015-08-05 01:49:10 -04:00
guerler cc46b65d16 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into upload_000 
Conflicts:
	static/style/blue/base.css
 2015-08-05 01:05:35 -04:00
guerler 1338904288 Separate file submission from upload queue, augment and generalize send function 2015-08-05 01:03:40 -04:00
guerler ecd38ef6db Enable drag-and-drop, use dropdown instead of select, style fix uploadbox.js 2015-08-02 12:54:05 -04:00
guerler f753a6159e Fix for settings popup and more code cleanup 2015-07-31 10:32:12 -04:00
Carl Eberhard de375004c9 UI, histories: render nice_size on the client 2015-07-30 13:10:13 -04:00
guerler f83eaa8fe7 Uploadbox plugin touchup 2015-07-30 12:52:47 -04:00
guerler 5cdd511b7a Merge branch 'dev' of https://github.com/galaxyproject/galaxy into upload_000 
Conflicts:
	static/style/blue/base.css
 2015-07-30 12:46:12 -04:00
Carl Eberhard 2c2f49bf8e Visualizations, trackster: allow the user to add the dataset launched from as a new track in an existing trackster visualization; add utils/query-string-parsing.js for pulling query params from the query string 2015-07-29 13:57:34 -04:00
guerler e5d61f3766 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into upload_000 
Conflicts:
	static/style/blue/base.css
 2015-07-29 00:50:20 -04:00
guerler a022738cf2 Move uploadbox variables to local scope 2015-07-23 13:22:02 -04:00
guerler dbc1bd50b4 Code style adjustments for uploadbox code 2015-07-18 16:51:19 -04:00
guerler 04eadf4bfc Fix uploadbox trigger for local upload 2015-07-18 16:42:30 -04:00
Carl Eberhard d31822e6d4 Trackster, chromosome interaction: fix display of chrint files in trackster, do not apply config default_value if explicitly set to undefined, clean line endings 2015-07-15 12:45:19 -04:00
guerler d01c108375 Reduce form mako to json generation, load form just once 2015-05-24 15:37:00 -04:00
guerler e5d19d9999 Accept 'None' as valid value 2015-05-13 11:24:32 -04:00
Carl Eberhard ef382f7332 Client: do not remove console statements when compressing; UI, Collections: propagate hasUser to collection panels, style fixes 2015-03-18 09:30:18 -04:00
Carl Eberhard ba20f5f6e1 Fix bad commit (adding files) 2015-03-17 10:47:31 -04:00
guerler dc34c09b3e Ui: Change log output 2015-03-09 13:31:11 -04:00
guerler b23a551aa2 Ui: Add prefix to unique id 2015-03-06 20:01:51 -05:00
guerler 823c72c671 Ui: Fix utility function name 2015-03-06 19:34:02 -05:00
guerler c658623bb8 Forms: Use determistic ids for dom elements, remove unnecessary find call 2015-03-06 17:17:27 -05:00
Aysam Guerler 04ccb2389c ToolForm: Move forward with drill down element, simplify validation 2015-02-11 11:03:22 -05:00
Carl Eberhard 3ec57d0833 UI, utils: modularize (AMD) naturalSort and move to utils 2015-02-10 13:42:59 -05:00
Carl Eberhard 89d76ae929 UI: remove unused LazyDataLoader module 2015-02-09 17:47:30 -05:00
Carl Eberhard cb0428e94a UI: better defesive prog in metrics logger 2015-02-09 11:18:11 -05:00
Aysam Guerler 836b3bb913 Ui: Revise portlet margins 2015-02-06 11:05:23 -05:00
Dannon Baker 98c6d2a5de Remove arbitrary limit of '50' uploads via FTP. If this turns out to be an issue, we can revisit it. This was actually an old bug if you manually selected more than 50 unexpected things would happen without erroring. 2015-01-23 13:23:15 -05:00
Aysam Guerler 178666baeb ToolForm: Fix optional dataset parameters, fix inconsistencies in parameter handling 2015-01-23 12:04:50 -05:00
Aysam Guerler b709d7c061 Update to_html function for text tool, generalize text fields, remove trailing tabs 2015-01-21 11:20:02 -05:00
Aysam Guerler 9ba84f4cc3 Generalize is_dynamic property, fix error validation for workflow tool form 2015-01-20 22:02:21 -05:00