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20,357 Commits 69 Branches 243 Tags
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Commit Graph
2810 Commits
Author SHA1 Message Date
Dannon Baker 84464288b1 Merge pull request #1184 from guerler/fix_download_links_002 
Filter download links, avoid warning dialog
 2015-12-01 10:19:22 -05:00
Nate Coraor 9e28f2e786 Merge branch 'release_15.10' into dev 2015-11-30 14:13:26 -05:00
guerler 2e97553194 Filter download links 2015-11-28 04:35:58 -05:00
Martin Cech e19b7f656f fix the extra slash in URL when creating folder 2015-11-23 15:14:15 -05:00
Martin Cech e142beaffe replace wrong class name 2015-11-23 15:08:25 -05:00
guerler 368da171f5 Call onbeforeunload before hiding iframe through display() 
Validated message
 2015-11-23 11:12:03 -05:00
carlfeberhard 119e26f4e5 Merge pull request #1142 from dannon/menu_onclick_addition 
Menu onclick addition
 2015-11-20 15:15:08 -05:00
carlfeberhard 844facd1f1 UI, Lists: throttle selector animation when number of list items > 20 2015-11-20 14:55:14 -05:00
Dannon Baker 81f1b7f8e0 Remove debugging logic and shortcut. 2015-11-20 13:17:46 -05:00
Dannon Baker f0e28555af Support onclick for menu items. 2015-11-20 12:11:55 -05:00
Dannon Baker f61ec1c3c0 Merge and rebuild client 2015-11-19 20:34:32 -05:00
Dannon Baker 0fdca7d40a A large assortment of escaping fixes to primarily grids and javascript templating, and one bad-data-ingress fix (copy history name). 2015-11-19 20:27:25 -05:00
Nicola Soranzo c252987b4c Merge branch 'master' into dev 2015-11-18 10:15:22 +00:00
Nicola Soranzo 3ffa607c15 Deprecate old library UI in the "Shared Data" menu. 2015-11-17 17:24:39 +00:00
Nate Coraor d8152f3336 Merge branch 'release_15.10' into dev 2015-11-17 11:37:05 -05:00
guerler 0a09de5453 Show welcome page with required login, remove iframes 
Reinsert iframe for login

Use iframes
 2015-11-16 14:47:59 -05:00
jgoecks ce418d33fe Resolve conflicting label CSS class. 2015-11-13 14:10:10 -05:00
Mark Einon 67d0bcb5b3 Trivial: Replace unnecessary duplicated var check with 'else if' 2015-11-12 15:38:18 +00:00
guerler 6580701395 Fix parsing of message configuration 
Fix default value

Add root to Galaxy object
 2015-11-10 23:51:29 -05:00
Marius van den Beek 36797b3195 Add changed static files. 2015-11-10 12:25:01 -05:00
Martin Cech 75d6489348 Merge pull request #1049 from mvdbeek/library_add_from_history 
Fix import of history datasets into library.
 2015-11-10 12:22:49 -05:00
Marius van den Beek 4f824cb920 Add changed static files. 2015-11-10 17:37:28 +01:00
Daniel Blankenberg 39ff0e9d76 Merge pull request #1044 from jmchilton/release_15.10_to_dev 
Bring 15.10 (and 15.07) fixes into dev.
 2015-11-10 10:42:02 -05:00
Martin Cech daccea42bd Merge pull request #1040 from guerler/revise_logging_000 
Fix log statements and link to logger
 2015-11-09 10:26:54 -05:00
John Chilton dc534bb258 Merge branch 'release_15.10' into dev 
Conflicts:
	client/galaxy/scripts/mvc/grid/grid-view.js
	static/maps/mvc/collection/list-of-pairs-collection-creator.js.map
	static/scripts/mvc/collection/list-of-pairs-collection-creator.js
 2015-11-09 15:19:02 +00:00
guerler 76bcfaa0ff Fix log comments 
Use emit

Fix namespace

Fix namespace

Remove empty line

Check if logger exists

Fix comment

Redo

More

Fix yet another log

Fix statements

More fixes

Move emitter
 2015-11-07 00:45:00 -05:00
guerler 975a94ce01 Pack scripts 2015-11-05 10:44:17 -05:00
guerler bbc3e943e7 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_multiselect_000 2015-11-05 10:43:28 -05:00
guerler 8a9372b989 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_multiselect_001 2015-11-04 11:06:48 -05:00
Dannon Baker 1649570e78 Rebuild client styles, merge. 2015-11-04 08:37:22 -05:00
guerler 5c56ec8bc7 Fix style of labels in grids 
Fix styles

Pack styles
 2015-11-04 04:09:10 -05:00
guerler 0fe684c688 Fix upload button style 
More fixes
 2015-11-04 03:04:38 -05:00
guerler 7717659c78 Allow resizing of regular multi-select boxes 
Remove event handler

Add mouse leave event handler

Improve visibility and accessibility

Fix tag name

Style compromise

Repack charts
 2015-11-04 02:16:45 -05:00
guerler f57d917949 Patch select2 to avoid resetting highlighted location 
Keep search term
 2015-11-03 15:41:46 -05:00
Dannon Baker 593cb4074b Merge pull request #1018 from guerler/revise_promise_000 
Revise deferred queue, use jQuery promises
 2015-11-03 13:32:00 -05:00
guerler 142db64fb3 Use remove instead of empty if iframe is shown 2015-11-03 12:48:55 -05:00
Dannon Baker 86648d23e2 Merge pull request #1011 from carlfeberhard/logging 
Client side logging
 2015-11-03 11:01:51 -05:00
Dannon Baker 9fd0bd1cc1 Manual merge and rebuild due to conflict. 2015-11-03 10:54:40 -05:00
guerler 168d42acf3 Keep select field open for multi select 2015-11-03 09:58:24 -05:00
guerler cc4e8e4a34 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_promise_000 2015-11-02 14:48:52 -05:00
guerler f1f5efe703 Fix display call 
Fix config

Fix naming
 2015-11-02 14:47:48 -05:00
guerler 2e21e027b0 Insert promises 
Revision

Revise deferred class to use promises

Update charts

Fix comment

Use resolve and reject properly

Fix comments

Fix comments

Fix comments

Fix comment

Improve naming/comments

Remove unnecessary queue handler

Fix naming
 2015-11-02 12:59:16 -05:00
James Taylor 9e0973d720 Labels for individual tools in tool panel. 
Allow one or more labels to be attached to a tool in the tool panel.
These will be rendered to the right of the tool's link using the
boostrap label style. Styles for specific labels can be defined in CSS,
specific colored labels for "new" and "beta" are defined.
 2015-10-31 16:04:39 -04:00
carlfeberhard b67601f74c Client logging: move logger assignment into Galaxy object, both Galaxy.user and all LoggableMixins will now respond to debugging, properly localize error messages 2015-10-30 15:58:08 -04:00
carlfeberhard b75150ade7 Client logging: remove 'namespaced', allow 'log' to be added in the standard way (now that browsers are compat with this), simplify interface in the Galaxy object 2015-10-30 10:43:11 -04:00
guerler bd383cc518 Repack scripts 2015-10-29 23:54:49 -04:00
carlfeberhard 945f369003 Client logging: namespace current loggables 2015-10-29 17:09:56 -04:00
carlfeberhard d96fc60e1f Client logging: allow focusing on one or more namespaces, add function to more easily namespace loggers 2015-10-29 13:09:28 -04:00
carlfeberhard a9ac9193c1 Client logging: adapt metrics logger for optional debug logging 2015-10-29 12:27:17 -04:00
Nate Coraor 3b133d0d92 Merge pull request #917 from carlfeberhard/release_15.10 
[15.10] UI, list of pairs collection creator: create regexp from filters for …
 2015-10-28 13:26:19 -04:00