Commit Graph
13962 Commits
Author SHA1 Message Date
Ahmed Awan b0bc431609 Create ToolSuccess route and refactor component 2023-02-03 10:19:44 -05:00
Marius van den Beek 2b12131ced Merge pull request #15478 from mvdbeek/toggle_output_fix
[23.0] Fix workflow output activiting on activating node
2023-02-03 10:13:00 +01:00
Dannon c8c4b21c29 Merge pull request #15472 from mvdbeek/fix_multi_connection
[23.0] Fix multi-input connection handling in workflow editor
2023-02-02 21:40:39 -05:00
Dannon 32f972cdf5 Merge pull request #15486 from ahmedhamidawan/toolbox_remove_expression_tools
[23.0] ToolBox remove Expression Tools section
2023-02-02 17:37:43 -05:00
Marius van den BeekandLaila Los c21b51f9ef Replace unnecessary map with forEach
Co-authored-by: Laila Los <44241786+ElectronicBlueberry@users.noreply.github.com>
2023-02-02 19:42:10 +01:00
mvdbeek c49abd346c Fix workflow output activiting on activating node
Fixes https://github.com/galaxyproject/galaxy/issues/15365
2023-02-02 18:36:16 +01:00
mvdbeek 55eecaa50c Drop unused import 2023-02-02 16:29:02 +01:00
mvdbeek e2bb958b56 Fix multi-input connection handling in workflow editor
Fixes https://github.com/galaxyproject/galaxy/issues/15458, and also
fixes all input connections being removed when deleting a node that
connect to a multi-input.
2023-02-02 16:29:02 +01:00
Marius van den Beek 0c336c34b0 Merge pull request #15487 from nsoranzo/release_23.0_python3.11
[23.0] Add support for Python 3.11
2023-02-02 10:26:46 +01:00
Nicola Soranzo a7ddf89690 Replace 2 Enums with Literals
Fix the following mypy errors on Python 3.11:

```
$ tox -e py311-mypy
py311-mypy: commands[0]> mypy test lib
lib/galaxy/schema/schema.py:1099: error: Incompatible types in assignment (expression has type "str", base class "Enum" defined the type as "Callable[[Enum], str]")  [assignment]
        name = "name"
               ^~~~~~
lib/galaxy/schema/schema.py:2722: error: Incompatible types in assignment (expression has type "str", base class "Enum" defined the type as "Callable[[Enum], str]")  [assignment]
        name = "name"
               ^~~~~~
```
2023-02-02 01:18:25 +00:00
Ahmed Awan bcf529e0a2 ToolBox remove Expression Tools section 2023-02-02 03:05:36 +05:00
Ahmed Awan 3c55a48050 ToolSearch trim whitespace in query 2023-02-02 02:41:29 +05:00
davelopez 1ed9a9bdb0 Fix duplicate output label warning condition
Only consider it duplicated when found on a different step.
2023-02-01 13:40:31 +01:00
davelopez 528e5f9505 Increase test coverage
This should catch the bug
2023-02-01 12:43:48 +01:00
Marius van den Beek 137348c816 Merge pull request #15463 from ElectronicBlueberry/workflow-editor-minimap
[23.0] Workflow editor minimap rework
2023-02-01 10:29:30 +01:00
David López 43a7db4ea0 Merge pull request #15464 from dannon/fix-toolbox-sort-runtime
[23.0] Fix runtime type checking for toolbox sorting
2023-02-01 09:42:36 +01:00
Laila Los 84c653ccf3 fix typo 2023-01-31 22:21:00 +01:00
Dannon Baker 86e4511e6c Fix minimap node background color to use the same as nodes in error 2023-01-31 15:50:21 -05:00
Dannon Baker 9420f3a9e1 More comfortable initial pan for workflow editor 2023-01-31 15:18:11 -05:00
Dannon Baker f09be47dcc Fix runtime type checking for toolbox sorting 2023-01-31 14:43:06 -05:00
Dannon Baker 346a94f5df Multi-word component name 2023-01-31 14:32:28 -05:00
Dannon Baker e532476195 prettier 2023-01-31 14:29:43 -05:00
Laila Los a1ceb23e9c fix spelling 2023-01-31 19:05:25 +01:00
Laila Los 5ad8d35350 remove unused geometry functions 2023-01-31 19:04:51 +01:00
Laila Los 725f9199f3 move prop definition to typedef 2023-01-31 18:59:46 +01:00
Laila Los da22978da5 add annotation 2023-01-31 18:59:46 +01:00
Laila Los 23b9fb8e5e move viewportBounds to computed 2023-01-31 18:59:46 +01:00
Laila Los dacb91fcc0 add annotations
unify event casing
2023-01-31 18:59:46 +01:00
Laila Los bd79578693 remove unused css 2023-01-31 18:59:46 +01:00
Laila Los 419b50b512 remove old minimap 2023-01-31 18:59:46 +01:00
Laila Los 5c74b6c7de add resize and grad
drive with css variables
2023-01-31 18:59:16 +01:00
Laila Los 0cf1394c84 add in bounds check function 2023-01-31 18:59:16 +01:00
Laila Los 7af5444cc0 use css var to determine size 2023-01-31 18:59:16 +01:00
Laila Los 4fe7cdf6a8 add methods to transform
fix normal transform
2023-01-31 18:59:16 +01:00
Laila Los 813c1758b7 add transform class 2023-01-31 18:59:16 +01:00
Laila Los 3122588e32 add new canvas based minimap node 2023-01-31 18:59:16 +01:00
Martin Cech d15736caae Merge pull request #15462 from dannon/fix-d3v3
[23.0] Provide d3@3 for older visualization compatibility
2023-01-31 17:59:41 +01:00
Martin Cech e16a759a9b Merge pull request #15459 from dannon/vue-type-fixes
[23.0] Vue proptype fixes
2023-01-31 17:35:43 +01:00
Marius van den Beek 150bcb5221 Merge pull request #15455 from dannon/fix-panel-sorting-workflows
[23.0] Fix workflow toolbox sorting of workflows
2023-01-31 16:59:10 +01:00
Dannon Baker 9d14ea0dd1 Allow secondary version of d3 for compatibility during transition of src/viz 2023-01-31 10:20:29 -05:00
Dannon Baker d6dff77d5c Fix some usage of types from non-ts (yet) files. 2023-01-31 09:47:51 -05:00
Dannon Baker cc725cfc9d Prevent tool panel from sorting workflows list -- it was noted that this is, unlike the tool sections, actually a chronologically ordered list that is more useful that way 2023-01-31 08:19:39 -05:00
mvdbeek 035e1cf6f7 Add Selenium test that verifies condiional step handling 2023-01-31 12:16:39 +01:00
mvdbeek c2a25138b4 Reset extra step connection for when when removing input 2023-01-30 17:32:45 +01:00
mvdbeek f8cf8ed7f5 Mark disconnected required inputs in editor 2023-01-30 17:32:45 +01:00
Marius van den Beek 85c50aaf90 Merge pull request #15403 from davelopez/23.0_fix_create_switch_histories_anonymously
[23.0] Disable create and switch histories anonymously
2023-01-30 17:29:37 +01:00
Dannon 6d374c9955 Merge pull request #15422 from guerler/avoid_metadata_setting
[23.0] Hide metadata auto-detection option if dataset is in improper state
2023-01-30 11:28:33 -05:00
Dannon d2c0cb851e Merge pull request #15434 from ahmedhamidawan/fix_fullname_tool_search
[23.0] Add name+description ToolSearch
2023-01-30 11:26:17 -05:00
Dannon cbda65440f Merge pull request #15432 from ahmedhamidawan/workflow_toolbox_pointer
[23.0] ToolBoxWorkflow fix tool compatibility and search
2023-01-30 11:25:50 -05:00
Dannon 245bda4685 Merge pull request #15381 from davelopez/23.0_fix_history_selection_highlight
[23.0] Fix history modal selection highlight
2023-01-30 11:24:43 -05:00