Anton Nekrutenko
87e4ce0100
Fix to sam2interval bug reported by Kathy So. The bug was causing sam2interval to successfully parse unmapped sam entries, which have no valid coordinate.
2011-06-10 14:42:41 -04:00
Daniel Blankenberg
4eb1b0a79f
Better determination in tests if a provided input is a DataToolParameter to better handle .gz and .zip uploads and allowing uploads from a sub-directory of test-data/.
2011-02-28 12:16:28 -05:00
Kelly Vincent
f61d147034
Added --max and --un file output options to Bowtie and modified tests to test for them.
...
Made Bowtie test files longer (more than one test read).
Added explanation of canonical and full reference genome variants to BWA and Bowtie.
Added informative labels to output files for NGS tools.
2010-12-01 10:54:35 -05:00
Daniel Blankenberg
37ae9ac29d
Create NGS peak calling section. Add MACS peak caller. Move GeneTrack to new section. Increment sam2interval tool version.
2010-02-05 16:06:27 -05:00
Kanwei Li
a947686b77
fix some typos for tools in folders N-Z
2009-09-25 02:06:03 -04:00
Anton Nekrutenko
cb635b8148
Tweaks plus reducing size of Assaf's icons
2009-09-21 15:40:22 -04:00
Anton Nekrutenko
eaed01bcf4
First pass of consolidating NGS tools
2009-09-18 10:27:03 -04:00
Anton Nekrutenko
75ce85cd3f
Added sam2interval converter
2009-09-16 16:00:09 -04:00
Anton Nekrutenko