Commit Graph
8298 Commits
Author SHA1 Message Date
Dannon 3337e249f5 Merge pull request #10489 from guerler/radio_buttons
Revise style of radio button groups to improve visibility
2020-11-09 15:20:17 -05:00
Nicola Soranzo cb8a310e74 Merge branch 'release_20.09' into dev 2020-11-09 12:53:53 +00:00
John Chilton cef3b9ab5c Merge pull request #10619 from OlegZharkov/trs-auto-import
auto-import workflow with trs
2020-11-08 08:02:42 -05:00
Marius van den Beek 3519db8698 Merge pull request #10652 from OlegZharkov/fix-race-20.09
[20.09] fix dataset_manipulation and logged_dataset_manipulation
2020-11-07 19:44:06 +01:00
Oleg Zharkov e95246cbcb move logged_dataset_manipulation and dataset_manipulation to computed 2020-11-07 13:07:07 +01:00
Marius van den Beek bcc7ea0afc Merge pull request #10637 from assuntad23/bugfix/SavedRulesSelectorIssues
Fix saving rule builder rules when uploading in rule editing view
2020-11-07 13:03:12 +01:00
Dannon 08e839538b Merge pull request #10499 from guerler/upload_button_revision
Move upload button below Tool panel header, increase size, add label
2020-11-07 06:58:44 -05:00
Assunta DeSanto 2f0582e737 running Prettier 2020-11-06 11:52:09 -05:00
Assunta DeSanto 6fb0d8f824 fixing an error 2020-11-06 11:47:02 -05:00
Assunta DeSanto 3d2b6d40dd Fixing unit tests 2020-11-06 00:33:28 -05:00
Assunta DeSanto dedc2e79d7 Fixing unit tests 2020-11-06 00:30:08 -05:00
Assunta DeSanto 89007a80e5 Fixing unit tests 2020-11-06 00:17:25 -05:00
Assunta DeSanto 1d3a9ad8bd Moving data of saved rules to a separate component from the template view 2020-11-05 23:44:34 -05:00
mvdbeek 7df17504bf Merge branch 'release_20.09' into dev 2020-11-05 19:03:01 +01:00
mvdbeek ad7a6ca430 Update input label on workflow node when input changes 2020-11-05 18:49:22 +01:00
mvdbeek 6e3e91b6a2 Fix updating workflow node input terminal
This fixes a silent error when hitting
`this.outputTerminals[name].$el.remove();`

This seems to not be necessary, but it is super weird that there is no
error logged. I just found it by stepping through this line by line in
the debugger.

This fixes https://github.com/galaxyproject/galaxy/issues/10622
2020-11-04 21:35:25 +01:00
Oleg Zharkov 9b07319de4 add spinner on autoload 2020-11-03 20:40:34 +01:00
Oleg Zharkov bef0faef05 prettier 2020-11-03 18:33:09 +01:00
Oleg Zharkov ea419e0ad6 make run-form redirect optional 2020-11-03 18:12:58 +01:00
Oleg Zharkov 493d37fb2b redirect to run page if version is specified 2020-11-03 18:11:13 +01:00
John Chilton 9985c85046 Merge pull request #10582 from mvdbeek/fix_ldda_circular_dependency
[20.09] Resolve LDDA <-> Library Dataset circular dependency
2020-11-03 10:57:27 -05:00
Oleg Zharkov 77e19d4918 implement auto-import 2020-11-03 16:07:10 +01:00
mvdbeek 2f5742c7c0 Merge branch 'release_20.09' into dev 2020-11-03 16:04:22 +01:00
Martin Cech a44c9ec4a7 Merge pull request #10611 from mvdbeek/backport_10511
[20.09] Backport Properly scale workflow node coordinates before saving workflow
2020-11-03 14:52:53 +01:00
Martin Cech 45b0a5d504 Merge pull request #10612 from mvdbeek/backport_10494
[20.09] Backport Fix drag and drop highlighting in tool form for data inputs
2020-11-03 14:48:50 +01:00
John Chilton 5d58c79c08 Merge pull request #10616 from OlegZharkov/20.09-trs-query-str
[20.09] fix  trs_id and trs_server query strings
2020-11-03 08:12:23 -05:00
Oleg Zharkov 8e21ff351f fix query string 2020-11-02 17:20:59 +01:00
guerler 8ecf77925e Fix drag and drop highlighting in tool form for data inputs 2020-11-02 16:38:58 +01:00
guerler 5dacaefbd8 Properly scale workflow node coordinates before saving workflow 2020-11-02 16:37:03 +01:00
cat-bro 3bca3c7ff1 fix trailing commas 2020-11-02 16:31:30 +01:00
mvdbeek ba5ee3017e Refresh folder content once import is complete
The way we did this previously we'd request new folder contents before
the folder item had been added. We can instead request the folder
contents once at the end of the chained import.
2020-11-02 16:23:16 +01:00
mvdbeek 540b77f2a6 Fix loading workflow version 0
Instead of checking that version is truth-y, check that version is an
Integer. Fixes https://github.com/galaxyproject/galaxy/issues/10593
together with b2ab9a3702.
2020-11-01 17:00:56 +01:00
guerler e86c03ef4f Fix workflow version reloading 2020-11-01 17:00:56 +01:00
mvdbeek c03cc3dbd4 Merge branch 'release_20.09' into dev 2020-11-01 16:59:35 +01:00
John Chilton 3358585c36 Merge pull request #10584 from mvdbeek/do_render_sections
[20.09] Fix missing section values on tool re-run
2020-10-30 09:33:59 -04:00
Marius van den Beek 05194ee8a0 Merge pull request #10581 from dannon/custos-overly-aggressive-fetch
[20.09] bugfix: external login component fetching idps when it should not
2020-10-29 19:53:04 +01:00
mvdbeek a55118c125 Go through rendering for hidden when cases 2020-10-29 15:41:53 +01:00
mvdbeek 9c4b86239f Fix values in section not set on re-run 2020-10-29 15:32:34 +01:00
Enis Afgan 1afb79d2b5 Merge pull request #10540 from guerler/enable_custom_logo
Allow admins to add an additional custom logo to the masthead
2020-10-29 09:40:35 -04:00
Dannon Baker c0d1a915a0 bugfix: external login component should not bother fetching idplists if custos/cilogon are not configured 2020-10-28 23:23:50 -04:00
Dannon Baker 5cc252c1a4 Worfklow typo fix in styling 2020-10-28 22:17:00 -04:00
Dannon Baker a6c7c9d947 Fix progress component floating text 2020-10-28 22:11:13 -04:00
Dannon Baker 0289505c00 Bugfix in collection job states initial text -- dangling } 2020-10-28 21:27:53 -04:00
mvdbeek 904917447a Mark workflow as changed if tools were upgraded
Fixes https://github.com/galaxyproject/galaxy/issues/8472
2020-10-28 13:26:10 +01:00
Oleg Zharkov 950cbfe739 typo 2020-10-27 21:19:39 +02:00
Oleg Zharkov 6add2c9546 prettier 2020-10-27 21:12:30 +02:00
Oleg Zharkov 29b7bc3e4c show spinner during search 2020-10-27 21:12:30 +02:00
Oleg Zharkov 1502d3a9e8 remove seach text check during loading 2020-10-27 21:12:30 +02:00
Oleg Zharkov c8ece1298a show spinner only on first load 2020-10-27 21:12:30 +02:00
Oleg Zharkov 2c96acbac3 fix races, hide empty text and add busy spinner 2020-10-27 21:12:30 +02:00