Kanwei Li
74e6735d2c
trackster: caching works, faster loops, displays exon blocks, passes JSLint
2009-10-12 19:00:39 -04:00
Jeremy Goecks
4c401cddc1
Enables viewing of an importable/sharable history. Using the syntax /history/view?id=<encoded_history_id> produces a page that renders a history for viewing. A user need not be logged in to view the history.
2009-10-08 13:38:32 -04:00
Kanwei Li
f2cebd4366
refactor trackster, better failure message
2009-10-06 23:47:08 -04:00
Kanwei Li
ccc06268f9
trackster: feature tracks auto-resize to fit data, prepare for LRU cache
2009-10-01 14:01:53 -04:00
Kanwei Li
e43907785d
Trackster: only attempt dataset conversion once, UI/parsing improvements
2009-09-29 21:50:44 -04:00
Kanwei Li
c556f857b7
trackster now supports BED files
2009-09-25 18:47:40 -04:00
Kanwei Li
cb3fcbbb51
minor trackster
2009-09-23 19:11:12 -04:00
Kanwei Li
9d7a14f765
trackster: natural sort for chroms list, disable zooming when no data, can click on labels when selecting datasets
2009-09-23 17:32:16 -04:00
Kanwei Li
9fcb61e39c
new trackster lands
2009-09-22 21:51:11 -04:00
Jeremy Goecks
9d34116b8b
tags made available in history grid
2009-09-21 10:39:58 -04:00
James Taylor
b2c9c284de
More work on server side for tracks. Now uses converters instead of indexers. A wiggle to array_tree converter is provided. Still need to purge indexer stuff. This will not work without new bx egg (or likely at all)
2009-09-18 15:15:39 -04:00
Jeremy Goecks
61a9255da8
html escaping for tags
2009-09-17 12:45:36 -04:00
Jeremy Goecks
3d557a9a45
(1) Unicode support for tagging and (2) added tagging_common mako file to support creation and standardization of tagging elements across all pages.
2009-09-11 14:57:02 -04:00
Jeremy Goecks
ae25081e72
Another pass on tagging: fixed queries and minor UI issues and reintroduced tagging fields to templates.
2009-08-31 17:19:33 -04:00
Jeremy Goecks
2fc10839cf
Packed JS files for tagging
2009-08-28 15:44:28 -04:00
Jeremy Goecks
bb0736e136
JS files for tagging
2009-08-28 15:31:06 -04:00
James Taylor
7e142f27bf
Add packed script for pages, fix bug where users see other users pages
2009-08-25 12:58:38 -04:00
James Taylor
03bc248e9c
Merge
2009-08-24 15:55:39 -04:00
James Taylor
f1f8968282
Support for user defined pages. Page content is stripped down XHTML. Pages can be edited using a WYM editor, and have stable public urls. This is VERY PRELIMINARY, but functional
2009-08-24 15:53:17 -04:00
Kanwei Li
a5d50c690c
Remove unused js
2009-08-24 15:46:03 -04:00
James Taylor
0a852278e2
IE fixes for menu buttons
2009-08-23 17:13:04 -04:00
James Taylor
8e649f856e
Remove logging from galaxy.base
2009-08-23 14:01:08 -04:00
James Taylor
f79792af39
Repack jstore without comments
2009-08-21 14:28:46 -04:00
James Taylor
39899e246a
Fixing styles for history rename and share interfaces
2009-08-22 23:18:47 -04:00
James Taylor
9432797fc3
Rework popup menu styles. Popups are now larger, have borders, and have better highlight styles. The history options button is now a popup menu. (Also misc style fixes and improvements).
2009-08-06 10:29:51 -04:00
Kanwei Li
4178999e46
Require json2.js
2009-08-20 12:51:39 -04:00
Kanwei Li
ebef591149
Use JSON2.js for all JSON operations, and remove unused javascript files
2009-08-20 12:41:37 -04:00
James Taylor
ebacc6019c
Tweak workflow save changes to use more specific '#right-content'
2009-08-19 18:07:55 -04:00
Kanwei Li
cb2d7def71
Auto-save for workflow forms
2009-08-19 17:27:00 -04:00
Kanwei Li
5d2f4c9077
Fix workflow layout
2009-08-19 11:33:48 -04:00
Kanwei Li
5e5017a556
Slight tweak to resizing workflow overview
2009-08-13 13:43:25 -04:00
Kanwei Li
bf67b0f32d
Implemented local storage for preferences, obsoleting cookies that were used for this purpose
2009-08-13 13:16:58 -04:00
Kanwei Li
711ee51ee2
Allows storing of multiple preferences in one cookie using JSON. Use this to store workflow overview settings
2009-08-10 12:09:50 -04:00
Kanwei Li
fd0c853e3c
Documentation for dragging change
2009-08-06 16:11:40 -04:00
Kanwei Li
daf5c975f7
Can only resize overview using the border panels
2009-08-06 16:07:53 -04:00
James Taylor
56243cd613
Fix some display problems with the tabs. Sometimes you just have to use tables....
2009-07-10 18:33:36 -04:00
James Taylor
861f55c4fd
IE compatibility fixes in workflow editor javascript (groan)
2009-07-10 16:21:19 -04:00
Nate Coraor
93d484355b
New packed scripts
2009-06-26 09:22:31 -04:00
James Taylor
74db2397c5
Fixing up track browser UI. No longer uses session, cleaned up a bunch of unceccesary stuff. Still pretty limited -- coverage indexing doesn't seem to work right
2009-06-11 15:37:19 -04:00
James Taylor
537f8952ef
Merging Ian's trackster update with current head
2009-06-11 12:20:03 -04:00
James Taylor
8cfc65bb0f
Updating packed script for workflow editor
2009-05-01 12:24:07 -04:00
James Taylor
139a30e964
Handle the addition of new tool parameters better in the workflow editor. Default values will be filled in and a message displayed to the user
2009-04-29 13:46:02 -04:00
James Taylor
8f19b878dc
Fix for issubtype in workflow editor, would cause problems drawing connections for types with no inheritence relationships
2009-04-29 10:27:57 -04:00
Ian Schenck
feda672ffa
- Performance of indexers much improved.
...
- Indexing for tracks done in background with a visual treatment done to Trackster
- DB builds can be uploaded by a user (chromInfo/len extension).
- TODO: Add ability to change the dbkey of a dataset to any arbitrary string value.
2009-04-23 13:46:52 -04:00
James Taylor
9a979abb36
Fix workflow auto-layout to properly handle nodes with no connections
2009-04-09 14:57:08 -04:00
James Taylor
74046a48e5
Reworking of workflow canvas. It is now infinite (grows to fit nodes as added). An overview map has been added, which can be dragged to quickly move around large workflows
2009-04-09 14:50:13 -04:00
James Taylor
8dbf032b0a
Cleaning up auto-scrolling in workflow editor a bit
2009-04-07 17:20:01 -04:00
James Taylor
cff3a62b8d
Auto-layout in workflow editor (much room to improve)
2009-04-07 16:56:00 -04:00
James Taylor
6b1caa0880
Redo of iphone UI using jqtouch. All ajax now so it works as an app from the home screen without needing to load safari
2009-03-29 18:14:24 -04:00
James Taylor
13c372529d
Improving the overlay support, and using it to display quickies on the welcome page
2009-03-31 15:03:36 -04:00
Kanwei Li