8 Commits

Include renames

Author	SHA1	Message	Date
Nicola Soranzo	1b54c0bcd8	Calculate hash for new non-deferred datasets when finishing a job ... This is configurable with two new options: - `calculate_dataset_hash`: in which cases Galaxy should calculate a hash for a new dataset. Possible values: 'always', 'upload' (the default), 'never'. - `hash_function`. Possible values: 'md5', 'sha1', 'sha256', 'sha512' Hashes are calculated via a Celery task, so currently only if the 'enable_celery_tasks' option is set to true.	2024-11-21 15:55:14 +00:00
Nicola Soranzo	f7c5769ca5	Always validate hashes when provided ... Currently when uploading datasets with associated hashes, this were only validated if `validate_hashes=True` was also passed in the request. This commit drops `validate_hashes` completely and always validates hashes when they were provided.	2024-11-05 23:21:51 +00:00
John Chilton	93f2af6a44	Allow dataset and source checksum validation during materialization.	2024-09-30 13:25:02 -04:00
nuwang	0c0ed2a4e3	Fix test failures	2023-02-09 18:14:18 +05:30
Nicola Soranzo	3a8997ccf2	Replace `unittest.TestCase` in API, framework, performance, Selenium and ToolShed tests ... In API tests, replace no more working `uses_test_history` decorator (because the `history_id` method parameter is interpreted as a fixture) with a real class-level pytest fixture. As a consequence, replace use of `self.history_id` in API tests because it interferes with the class-level `history_id` fixture. Also: - Some type annotations	2022-11-07 15:44:01 +00:00
Nicola Soranzo	c35d8f2a06	Replace `unittest.TestCase` with pytest-based partial re-implementation ... Also: - Rename `FooBarTestCase` test classes as `TestFooBar`. These were collected by pytest only because they were `unittest.TestCase` derived, but normally pytest collects only test classes whose name starts with `Test`, see https://docs.pytest.org/en/7.1.x/reference/reference.html#confval-python_classes	2022-09-27 03:34:58 +01:00
mvdbeek	0bf7ed933e	Drop global setup_celery_includes ... Should be handled by autouse fixture	2022-05-27 17:33:55 +02:00
John Chilton	c5bf63bc91	Add DEFERRED datasets to Galaxy ... - Improves options and display around discarded datasets. - Adds new APIs for importing model stores. - Adds support to model store layer for importing/exporting workflow invocations and APIs and tests to support this. - Add new DEFERRED dataset state - with APIs for materializing them or the option to defer them on the worker node if using tool_evaluation_strategy=remote on the job destination. - UI and API options for uploading deferred datasets individually or into collections.	2022-05-23 19:48:47 -04:00