Nicola Soranzo
5390a07224
Merge branch 'release_21.09' into dev
2022-01-19 19:05:56 +00:00
mvdbeek
faddbeeca9
Use job.get_user_email systematically
2022-01-18 14:21:09 +01:00
Dannon
1a4b19a726
Merge pull request #13121 from gregvonkuster/destid_reports
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Add job reports for node types and execution times
2022-01-14 22:21:24 -05:00
Sergey Golitsynskiy
e496cd0ac2
Remove tool migrations api end points
2022-01-13 13:31:22 -05:00
greg
4c1ce27e0a
Add job reports for node categories and execution times
2022-01-05 14:03:44 -05:00
mvdbeek
6677ca1e4b
Fix link to WYMeditor css
2022-01-05 14:06:21 +01:00
Matthias Bernt
311836603d
remove is_multi_byte from tool_shed and templates
2021-11-27 14:28:30 +01:00
Dannon Baker
c3605c7112
Merge remote-tracking branch 'upstream/release_21.09' into dev
2021-10-19 09:59:21 -04:00
mvdbeek
9c4b6305b9
Merge branch 'release_21.05' into release_21.09
2021-10-18 08:29:12 +02:00
mvdbeek
2a4cd49083
Merge branch 'release_21.01' into release_21.05
2021-10-18 08:28:04 +02:00
mvdbeek
b1084df442
Disable text input for unselected inputs
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This means they won't be included in the submitted form.
Since we just pick the index of a selected dataset name in
`extract_steps` this would lead to the wrong inptu dataset label in the
workflow editor. Fixes the first issue in https://github.com/galaxyproject/galaxy/issues/12590
2021-10-05 11:49:36 +02:00
Dannon Baker
fe3d2fbafd
Merge remote-tracking branch 'upstream/dev' into webpack5
2021-09-22 09:18:14 -04:00
Marius van den Beek
03ff774f23
Merge pull request #11701 from OlegZharkov/share-to-users
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Refactor Sharing
2021-09-20 19:46:54 +02:00
Oleg Zharkov
972aa243a5
delete history share.mako
2021-09-17 10:18:37 +02:00
Dannon Baker
6bb7f97b21
Merge remote-tracking branch 'upstream/dev' into sanitize_allow
2021-09-15 21:33:08 -04:00
Oleg Zharkov
2f5f70b690
remove show_params.mako
2021-09-14 13:19:46 +02:00
guerler
ade2764e25
Fix padding in legacy dataset display mako
2021-08-31 11:24:14 -04:00
Dannon Baker
297873b80f
No need to use jquery here to get the body
2021-07-29 12:01:58 -04:00
Dannon Baker
7586efd98a
Update remaining templates to new bundle entrypoints
2021-07-27 08:55:55 -04:00
Dannon Baker
c872fb5317
Bundle entrypoint refactoring/fixing
2021-07-26 22:00:40 -04:00
Dave Bouvier
a0c824942e
First pass at modifying the tool HTML allow list
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- Enable partial matches for owner, repository, or tool ID
- Add API endpoints to GET, PUT, and DELETE list entries
- Partially vuefy client components
- Implement client-side interface with GET endpoint
TODO: Implement interface with PUT and DELETE endpoints.
2021-07-19 15:56:22 -04:00
mvdbeek
1d0e8c15fa
Merge branch 'release_21.05' into dev
2021-07-15 15:58:38 +02:00
Dannon Baker
f3476a2d81
Fix fugue pencil on old sharing not showing up correctly.
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Instead of tracking down and fixing the static I just
swapped to the fontawesome pencil already used elsewhere.
2021-07-08 10:10:07 -04:00
mvdbeek
9d45e2b0db
Remove unused legacy controller things
2021-06-19 16:28:56 +02:00
mvdbeek
89e5994219
Merge branch 'release_21.01' into dev
2021-05-04 20:03:58 +02:00
Dannon Baker
e15ec9173c
Use full page context (not just the short embed chunk) when injecting a viz in an iframe
2021-04-27 13:29:43 -04:00
setlen
4677cf9e0d
Make sure the options are all documented, remove some logging.
2021-02-12 21:23:52 +01:00
setlen
445fffcc57
Add support for Plausible analytics and Matomo analytics
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Solves #10954
2021-02-12 01:28:32 +01:00
Sergey Golitsynskiy
d21de8e8c8
Refactor; move logic into manager; add typing
2021-01-21 23:39:45 -05:00
Dannon
02f6e028bb
Merge pull request #10960 from astrovsky01/new_version_tab
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Add version tab which links to release notes to help tab
2021-01-08 11:08:38 -05:00
John Chilton
1fd4bce673
Refactor legacy grids - tool shed webapp shouldn't depend on reports webapp.
2020-12-31 15:18:57 -05:00
mvdbeek
b101b16270
Simplify JobInformation and DatasetInformation components
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JobInformation contained a lot of dataset related infos.
This reworks the JobInformation component to
- only deal with job-related fields
- pushes the off-topic fields into DatasetInformation
This also adds a component that can nicely display rows with
code (stdout/stderr/command line) and that can expand these.
I also refactored out the id decoding logic into a standalone component
for re-use.
This will be very useful for the invocation PR.
2020-12-21 21:07:58 +01:00
Alexander OSTROVSKY
249e8744eb
updated config name
2020-12-18 09:06:16 -08:00
Alexander OSTROVSKY
453cab45b2
Add version tab which links to release notes to help tab
2020-12-17 14:13:19 -08:00
Oleg Zharkov
bc41ce9e04
vuefy job information
2020-12-03 13:55:40 +01:00
John Chilton
42a9262f9c
Merge pull request #10233 from jmchilton/data_inspector
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User-facing objectstore metadata.
2020-11-30 09:26:38 -05:00
John Chilton
3338a9966e
Merge pull request #10476 from jmchilton/dataset_info
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Fix report's library function call in dataset_info.mako.
2020-11-15 14:22:48 -05:00
Dannon
38623472af
Merge pull request #10583 from hexylena/extract-wf-primary
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Make extract wf action more visible
2020-11-09 08:37:05 -05:00
Helena Rasche
3d42d33cc1
make extract wf action more visible
2020-10-29 11:41:29 +01:00
mvdbeek
6acb23a011
Some more minor fixes for reports app
2020-10-26 14:59:21 -04:00
John Chilton
71052aee5a
Fix report's library function call in dataset_info.mako.
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The function it was importing was removed in 17.09 - https://github.com/galaxyproject/galaxy/commit/fe5983aafca1fae0b60ed16838799b58f4aca11c#diff-83bbf117628d0c9972eb7f21b518985888ab293c854c1e2123a9f1f8d5f77d15 .
2020-10-26 14:59:21 -04:00
guerler
850a978b9b
Parse secondary logo in legacy masthead mako
2020-10-25 10:02:04 -04:00
John Chilton
5a00d29a0c
User-facing objectstore metadata.
2020-10-09 09:09:32 -04:00
Nicola Soranzo
9d74bba7fb
Drop support for retired Python 3.5
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Upgrade syntax using `pyupgrade --py36-plus` .
Manually drop several `six` imports.
Also:
- Remove broken pr_cache in scripts/bootstrap_history.py
- Fix broken prefix removal in lib/galaxy/tool_util/deps/mulled/mulled_build.py
2020-10-07 11:52:13 +01:00
Oleg Zharkov
91f0757649
vuefy dataset information
2020-10-01 17:41:06 +02:00
Dannon Baker
e06386fcc0
Fix re-initializing of the masthead when embedded
2020-09-29 15:15:48 -04:00
guerler
cd206c4552
Remove mako and manual mount helper for invocations report
2020-09-19 09:52:56 -04:00
guerler
fc0ce9da64
Mount Invocations report through page controller for now
2020-09-16 16:04:49 -04:00
guerler
dfd3e5c50f
Remove legacy code for page loading from mako and helper, mount vue component instead
2020-09-16 16:04:49 -04:00
Dannon Baker
4f21e4db54
Add user-is-owner context for display of published workflows.
2020-09-14 10:15:06 -04:00
Nicola Soranzo