Commit Graph
1316 Commits
Author SHA1 Message Date
Carl Eberhard 86bd4f29ba JS MVC: add SessionStorageModel to base-mvc 2013-11-21 16:43:43 -05:00
Carl Eberhard 2c7f48b079 UI: move loading indicator into ui.js, add cover option 2013-11-21 16:22:58 -05:00
Carl Eberhard e64bc6a869 UI, History panel: connect search to HDAs 2013-11-21 14:16:09 -05:00
Carl Eberhard 3e3c41a567 HDA UI: remove visualizations button for anon users, fix tooltip/popup when only one visualization is found 2013-11-20 11:25:41 -05:00
Carl Eberhard de81dc63f7 HDA UI: implement multi select; pack scripts 2013-11-20 11:01:24 -05:00
Aysam Guerler 296911b2e7 Upload: Modify selection rule 2013-11-19 22:55:20 -05:00
Aysam Guerler 0ea496733b Upload: Fix genome selection feature 2013-11-19 22:49:48 -05:00
Aysam Guerler 4d554b605f Upload: Transfer first genome selection to unselected genome selectors 2013-11-19 16:30:55 -05:00
Aysam Guerler 98129e044d Upload: Do not use root when nginx_upload_path is defined 2013-11-19 15:45:49 -05:00
Aysam Guerler 9efc2a16f8 Upload: Use nginx_upload_path setting 2013-11-19 14:56:07 -05:00
Jeremy Goecks d1c091fa11 Trackster: more improvements for drawing deletions in read and variant track. 2013-11-18 15:57:15 -05:00
Jeremy Goecks d3041bd82e Trackster painters: rename y_center variable to y_start to reflect real position. 2013-11-18 14:18:10 -05:00
Jeremy Goecks e5621a9485 Trackster: add support for detecting and drawing deletions in VCF datasets. Create shared read painter utils that are used by multiple painters. 2013-11-18 13:55:43 -05:00
Carl Eberhard 17f642019c History panel: ensure tooltip deletion on hda view removal, add class selectors for primary action buttons; pack scripts 2013-11-18 12:39:52 -05:00
Aysam Guerler 51e7a2935a Grids: Reduce mako templating to json generation, introduce GridsView, bug fixes
iG: changed templates/webapps/galaxy/tracks/history_select_grid.mako
2013-11-17 05:08:25 -05:00
Carl Eberhard dd315841b2 History panel: fix disabled class on icon buttons 2013-11-15 15:53:59 -05:00
Carl Eberhard d06f88455e Update jquery.form.js to 3.45 and fix chrome upload bug; pack scripts 2013-11-15 15:18:18 -05:00
Aysam Guerler 9f97bad68d UI: Fix async submit of grids 2013-11-14 02:31:07 -05:00
Jeremy Goecks f9b3c918cf More Trackster CSS cleanup. 2013-11-12 10:10:13 -05:00
Aysam Guerler 6d376aa4ed UI: Fix tooltip placement for masthead icons 2013-11-11 16:00:10 -05:00
Jeremy Goecks 9869131aae Merge stable into default branch 2013-11-11 13:34:14 -05:00
Jeremy Goecks 5b0ff952fa Trackster visual analysis: (a) fix misreference to name and (b) do not get values for complex tool parameters. Pack script. 2013-11-11 13:32:31 -05:00
Jeremy Goecks ec1855f56e Merge in stable to default 2013-11-11 12:26:06 -05:00
Jeremy Goecks c1d4a49d6d Trackster: hide tool by default. Pack script. 2013-11-11 12:18:40 -05:00
Carl Eberhard 0d2ee886fc History panel: display error message when anon user tries to create a new history, do not re-render; pack scripts 2013-11-11 11:48:28 -05:00
Jeremy Goecks 901a787793 Merge in stable branch. 2013-11-10 13:10:04 -05:00
Jeremy Goecks a16d94ca3e Trackster: fix bug in positioning read connector. Pack scripts. 2013-11-10 13:07:43 -05:00
James Taylor 688d90babc Merge stable -> default 2013-11-09 17:07:16 -05:00
James Taylor e2684b4d1f Fix trackster dbkey selection in safari 2013-11-09 17:05:34 -05:00
Carl Eberhard 571405de76 UI, hda model and user model: prefix urlRoots with galaxy_config.root 2013-11-08 15:29:17 -05:00
Jeremy Goecks f300313a97 Trackster: (a) less-ify stylesheet; (b) update styles to project track header over data and adjust other styles as needed; (c) update styles to compress tracks and data as much as possible. 2013-11-08 11:28:41 -05:00
Jeremy Goecks 6bde18ad2e Automated merge of stable branch 2013-11-08 11:16:52 -05:00
Jeremy Goecks bf20e2db8a Trackster: only sort amongst tracks and groups, not other items. 2013-11-08 11:14:43 -05:00
Carl Eberhard 108f30d541 Popupmenu mvc: fix anchor target in renderOptions; Visualizations registry: default link target to galaxy_main; Scatterplot (in registry): general refactoring and cleanup, paginate data instead of loading all, allow zoom and pan; pack scripts 2013-11-08 11:02:23 -05:00
Carl Eberhard a55fab57f8 UI, user model: make urlRoot path absolute 2013-11-08 10:44:39 -05:00
Carl Eberhard 8fda012fab History panel: fix naming bug in purge async error handling 2013-11-05 11:33:06 -05:00
Dannon Baker 8882948eb6 Merged in sjguest/galaxy-central (pull request #247)
Fixed bug in Trackster alert message, reporting dbkey as blank when can't load chroms.
2013-11-05 16:23:51 -05:00
Carl Eberhard 6ae1abe55f History panel: add better protection v. lack of Galaxy, Galaxy.currUser 2013-11-05 16:18:21 -05:00
Carl Eberhard bc4d6467a0 HDA API, show: remove force_history_refresh, add annotation; update: allow annotation or genome_build == None; Users API: add 'tags_used' as list of unique tags used by the user; History panel tags & annotations: into Backbone sub-views, cleanup; pack scripts 2013-11-05 15:32:07 -05:00
Aysam Guerler 80501157d7 UI: Rename galaxy.master.js to galaxy.masthead.js 2013-11-05 13:52:35 -05:00
Aysam Guerler 4789f253f5 UI: Rename frame_manager to frame 2013-11-05 13:36:07 -05:00
Aysam Guerler b6734f720b UI: Translate masthead mako code into js 2013-11-05 12:34:42 -05:00
Carl Eberhard 6ae6da9e2d History panel: remove refs to urls.tags 2013-11-02 12:41:18 -04:00
Carl Eberhard d297415e85 History panel, tags: use select2 for tag controls; Fix broken tags set implementation for HDAs; pack scripts 2013-11-01 15:25:41 -04:00
Carl Eberhard e441e788ab History panel: fix broken onclick event for display buttons; pack scripts 2013-10-31 14:44:34 -04:00
Aysam Guerler 1216a2e697 UI: Fix eye icon in iconbar 2013-10-31 14:42:03 -04:00
Simon Guest a9cdd4e7fa Fixed bug in Trackster alert message, reporting dbkey as blank when can't load chroms. 2013-10-31 14:27:19 +13:00
Carl Eberhard 3dbaac5334 History panel, style: use font awesome icons for dataset states, use lessc more effectively; pack scripts 2013-10-30 17:38:37 -04:00
Carl Eberhard eba81fd629 History panel: replace fugue sprites with font-awesome icons, style changes; pack scripts 2013-10-30 14:00:06 -04:00
Carl Eberhard 28fb375971 UI: update to font-awesome 4.0.1 (Note: there is a new syntax and naming scheme for fa icons - names and classes have changed) 2013-10-30 10:52:28 -04:00