Eric Rasche
6946a70aaa
Fixed JS boolean conversion
2014-10-18 18:38:04 -04:00
Eric Rasche
e572498896
More testing, now with passwords
2014-10-18 18:38:04 -04:00
Eric Rasche
628e3c83ce
Refactored function calls
2014-10-18 18:38:04 -04:00
Eric Rasche
f87fd539d5
Refactor to use require.js
2014-10-18 18:38:04 -04:00
Eric Rasche
640455119b
Commented out code planning for ie/ipy.js split
2014-10-18 18:38:04 -04:00
Eric Rasche
6901a23808
Requiring require.js
2014-10-18 18:38:04 -04:00
Eric Rasche
0cae9aad0c
More documentation
2014-10-18 18:38:04 -04:00
Eric Rasche
27cf4baac6
Refactored more variables out
2014-10-18 18:38:04 -04:00
Eric Rasche
bcaa7d9ef9
Removed 'galaxy defaults'
2014-10-18 18:38:04 -04:00
Eric Rasche
743b7d06c2
Bugfix and remove no longer used imports
2014-10-18 18:38:04 -04:00
Eric Rasche
4cff8c3409
Removed more unused code
2014-10-18 18:38:04 -04:00
Eric Rasche
1470ae6f80
Load JS with default names
2014-10-18 18:38:04 -04:00
Eric Rasche
69a98d5c51
moved JS into template
2014-10-18 18:38:04 -04:00
Eric Rasche
5fd45775f2
More static variables gone
2014-10-18 18:38:04 -04:00
Eric Rasche
49950e0fff
Moved URL writing into ie.mako
2014-10-18 18:38:04 -04:00
Eric Rasche
07bdd60e7a
Reverted change used during testing
2014-10-18 18:38:04 -04:00
Eric Rasche
ab5504547b
Moved more configuration into ie base module
2014-10-18 18:38:04 -04:00
Eric Rasche
8c8ec8aa68
Added hex gen stmt
2014-10-18 18:38:04 -04:00
Eric Rasche
c1fc6db957
Remove pointless statement
2014-10-18 18:38:04 -04:00
Eric Rasche
9c6b9bec6f
Copy imports
2014-10-18 18:38:04 -04:00
Eric Rasche
a4dd555ea3
More progress refactoring
2014-10-18 18:38:04 -04:00
Eric Rasche
183da2abc0
Moved more functions over
2014-10-18 18:38:04 -04:00
Eric Rasche
9201ccdd27
First function refactored
...
This looks like it will definitely work, could be the start of a base IE template
2014-10-18 18:38:04 -04:00
Bjoern Gruening
336f2bc6c3
simplify code
2014-10-18 18:38:04 -04:00
Eric Rasche
7a30335a6b
Typo/bug fixes
2014-10-18 18:38:04 -04:00
Eric Rasche
827cce2a67
Move notebook generation to more sensible place
2014-10-18 18:38:04 -04:00
Eric Rasche
91562ed2d0
Random seeding no longer necessary
2014-10-18 18:38:04 -04:00
Eric Rasche
866c1b51a1
Move functions to more appropriate code section
2014-10-18 18:38:04 -04:00
Eric Rasche
f25e51e678
Building on b366b0c and eb1c487, cleanup js-var stuff
2014-10-18 18:38:04 -04:00
Eric Rasche
2443e1adda
Exchanged conf calls for static variables
2014-10-18 18:38:04 -04:00
Eric Rasche
fc1f466c21
Added js-bool function
2014-10-18 18:38:04 -04:00
Eric Rasche
52f878f507
Changed login URLs
...
The current login URL automatically redirects. Lest bad things happen, and we make extraneous
requests, we just login at the "/login" route without the automatic redirect
2014-10-18 18:38:04 -04:00
Eric Rasche
eeea31047a
Refactor password generation
2014-10-18 18:38:04 -04:00
Eric Rasche
123a8e94ea
Simplification due to tying to galaxy release
2014-10-18 18:38:04 -04:00
Eric Rasche
901ca52aec
Refactor to function which will eventually be API call
2014-10-18 18:38:04 -04:00
Eric Rasche
e980278b45
Refactor to function
2014-10-18 18:38:04 -04:00
Eric Rasche
faf5afe320
Seed more randomly
...
Originally this was intended to make sure re-clicking a dataset would open the same port+IE, however
that's not a supported behaviour and there's no reason to keep that functionality around.
2014-10-18 18:38:04 -04:00
Eric Rasche
d5f141b7eb
plugin_path now available
...
As of https://bitbucket.org/galaxy/galaxy-central/commits/ddc9a669d53aa259d38efc882c890503444daaf5
2014-10-18 18:38:04 -04:00
Eric Rasche
1173909ee9
Refactor into function
2014-10-18 18:38:04 -04:00
Eric Rasche
d977726642
added comment
2014-10-18 18:38:04 -04:00
Eric Rasche
9e47db52bc
Unused variable
2014-10-18 18:38:04 -04:00
Eric Rasche
ffd3b10d5e
Added CORS required parameter to conf
2014-10-18 18:38:04 -04:00
Eric Rasche
64bff1a7f5
Fixes #15
2014-10-18 18:38:04 -04:00
Eric Rasche
c72cc47fdb
Finished work on spinning
...
- Removed a statically set port during testing
- Made variables local so we can be sure they aren't being mis-used
- Removed sleep
- New parameters needed in notebook load call
- Added main div to use for images/etc. Probably not necessary.
2014-10-18 18:38:04 -04:00
Eric Rasche
fb9cf86ceb
JS refactor
2014-10-18 18:38:04 -04:00
Eric Rasche
43304a2325
Modified error message to be more human-friendly
...
Many people will be intially overwhelmed by the stack trace they see within galaxy in
the even of a missing API key. Hopefully, hopefully, they'll be able to read the bold
portion at the bottom with instructions on generating one. It's mostly a measure to
decrease support tickets/requests
2014-10-18 18:38:04 -04:00
Eric Rasche
d32e61eca0
Moved docker delay to conf variable
...
Users may want to modify this variable, so I've moved it to the conf file.
2014-10-18 18:38:04 -04:00
John Chilton
048834a4a2
Use get_api_key() to fetch Galaxy API key...
...
This is a more appropriate abstraction layer to work at and provides the added benefit of auto-generating the key if it doesn't exist.
2014-10-18 18:38:04 -04:00
John Chilton
2cd37cc658
Use plugin_path to improve path logic...
...
Added in Galaxy commit https://bitbucket.org/galaxy/galaxy-central/commits/ddc9a669d53aa259d38efc882c890503444daaf5 . Added it to Galaxy cleanup the code and this is the result - oh well :) - it is at least more techically correct.
2014-10-18 18:38:04 -04:00
Eric Rasche
b4d641b013
Added documentation for each error message, fixed typo
...
Wiki pages were added for each of the error messages with a Cause and Solution.
This should be helpful to end users deploying our software
2014-10-18 18:38:04 -04:00
Eric Rasche