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19961 Commits
Author SHA1 Message Date
mvdbeek b1509ba76d Fix client unit tests 2025-05-02 19:37:28 +02:00
mvdbeek 4d71d88081 Improve edam test robustness 
No guarantee that the title won't change, and I think it has recently.
 2025-05-02 17:46:08 +02:00
mvdbeek 96c26d1028 Wait for `userLoad` before tool panel init 
We use the user to hash localStorage values, so gotta have it before we
determine whether the panel value needs to set.

Fixes https://github.com/galaxyproject/galaxy/issues/19461
 2025-05-02 17:45:00 +02:00
Alireza Heidari 886105eae9 Fix edit permission for datasets 2025-04-22 17:12:12 +02:00
Ahmed Awan 97a6ceed1a remove newHistoryTarget prop and instead check if history is different 
This means that we show the little icon to switch to the history for the invocation if that history isn't current, regardless of if results were generated in a new history or not.
 2025-04-15 10:13:35 -05:00
Ahmed Awan ba43210086 add jest to test new populated_state for job summary 2025-04-14 19:49:09 -05:00
Ahmed Awan 642ad39a5d use populated_state in the jobs summary to continue polling for states 
As we can see this value being set in `summarize_invocation_jobs` here https://github.com/galaxyproject/galaxy/blob/4a0cca07d97d7bbd22eb39ddab38d4d4354aa4fa/lib/galaxy/managers/jobs.py#L957-L1000, `new` seems to be a non-terminal `populated_state`, meaning this summary will have updates which will eventually produce some state counts.

To fix the bug of never getting a state count for the invocation view before the scheduling state becomes terminal, we now wait for the state to be something else than `new`, and only then look for other reasons to stop polling.
 2025-04-14 19:22:05 -05:00
Ahmed Awan a2dc1485c4 route to invocation on run 
**For a singular invocation** (excluding cases of batch runs), we now push to the `workflows/invocations/{invocation_id}` route when the workflow is run.
Without this, we would stay on the `workflows/run` route and refreshing would take you back to the run form, instead of the invocation view.
 2025-04-14 15:50:05 -05:00
Ahmed Awan 3dca5d9225 fix jobStatesSummary return type (should be allowed to return null) 2025-04-14 15:42:17 -05:00
Ahmed Awan 00aa61cbc0 [24.2] Ensure job states are fetched in invocation view 
Fixes https://github.com/galaxyproject/galaxy/issues/20003

We weren't checking if the job states summary had been fetched before we had the
```
if (invocationSchedulingTerminal.value && jobCount.value === 0)
```
check. `jobCount` would always be 0 if the states summary hadn't been fetched yet.
 2025-04-14 15:32:45 -05:00
David López d44bac9efb Merge pull request #19992 from davelopez/24.2_fix_user_object_stores_updates 
[24.2] Update selectable object stores after adding or editing them
 2025-04-14 09:59:06 +02:00
Marius van den Beek fed8750d25 Merge pull request #19985 from mvdbeek/fix_collection_drag_and_drop 
[24.2] Always set copy_elements to true
 2025-04-11 20:57:28 +02:00
Dannon 0f8eb33d05 Merge pull request #19987 from dannon/wizard-rate-limit 
[24.2] ChatGXY Error Handling
 2025-04-11 11:59:20 -04:00
davelopez 0c13d2df94 Add object store update functionality and refactor related components 
- Introduced `addOrUpdateObjectStore` method in the object store store for managing object stores without server reload.
- Updated `CreateInstance.vue` and `EditInstance.vue` to utilize the new method for adding or updating object stores.
- Enhanced `useConfigurationTemplateEdit` to accept the new callback for object store updates.
 2025-04-11 14:31:49 +02:00
Dannon Baker e78fc8a55b Typo, formatting, some cleanup. 2025-04-10 16:17:14 -04:00
Dannon Baker 8d109f8236 Better error display for wizard, when one happens. 2025-04-10 13:22:26 -04:00
mvdbeek 1037d32b00 Always set copy_elements to true 
Fixes https://github.com/galaxyproject/galaxy/issues/19984
 2025-04-10 18:50:21 +02:00
John DavisandAhmed Hamid Awan 77dd5769d4 Update client/src/components/License/LicenseSelector.vue 
Co-authored-by: Ahmed Hamid Awan <qe66653@umbc.edu>
 2025-04-10 12:46:15 -04:00
John DavisandAhmed Hamid Awan 1a879ac5f9 Use proper casing 
Co-authored-by: Ahmed Hamid Awan <qe66653@umbc.edu>
 2025-04-10 12:44:55 -04:00
John DavisandAhmed Hamid Awan 0732a7e5c9 Use proper casing 
Co-authored-by: Ahmed Hamid Awan <qe66653@umbc.edu>
 2025-04-10 12:44:40 -04:00
John DavisandAhmed Hamid Awan 4db7d2b6cb Use proper casing 
Co-authored-by: Ahmed Hamid Awan <qe66653@umbc.edu>
 2025-04-10 12:44:28 -04:00
Dannon Baker fbd793dc49 Refactor GalaxyWizard component to handle new ChatResponse format and improve error handling 2025-04-10 11:27:38 -04:00
Dannon Baker 744af02072 Rebuild client API schema for chat response 2025-04-10 10:57:24 -04:00
Dannon Baker 99de35ef5c Enhance response handling in GalaxyWizard component to support new ChatResponse format 2025-04-10 10:52:04 -04:00
John Davis a54f860da7 Fix default labels in external login selector 2025-04-10 10:24:25 -04:00
John Davis 740913a01c Fix default labels in custom builds selector 2025-04-10 10:24:03 -04:00
John Davis b00dc2aa69 Fix default labels in licence selector 2025-04-10 10:23:31 -04:00
davelopez d36e867445 Enhance FormData handling to prevent duplicate entries 2025-03-28 12:21:52 +01:00
davelopez 989a615f60 Refactor handleIncoming function to use toDataOption 
For reusability
 2025-03-28 12:20:29 +01:00
davelopez 19c448adc6 Add containsDataOption function to prevent duplicate entries in FormData 
When drag and dropping the same item
 2025-03-27 10:49:36 +01:00
davelopez cc2ee180d6 Move itemUniqueKey function to types module for reuse 2025-03-26 18:10:32 +01:00
Marius van den Beek 7bd3e599ad Merge pull request #19837 from jdavcs/24.2_multiselect 
[24.2] Do not reorder options in FormSelect component when multiselect disabled
 2025-03-26 10:01:59 +01:00
Marius van den Beek 1761e48055 Merge pull request #19853 from jdavcs/24.2_admin_ordering 
[24.2] Fix default ordering of items sorted by name
 2025-03-26 10:00:42 +01:00
John Chilton b1f401d56d Merge pull request #19797 from mvdbeek/fix_collection_builder_input_restriction 
[24.2] Fix collection builder input states
 2025-03-25 12:00:08 -04:00
Marius van den Beek 68be79f17a Merge pull request #19841 from ahmedhamidawan/fix_directory_form_element_encoding 
[24.2] Decode/encode FormDirectory paths to allow spaces (and other characters)
 2025-03-25 16:50:24 +01:00
Ahmed Awan c0762f7190 add jest to test https://github.com/galaxyproject/galaxy/pull/19841 2025-03-24 13:53:34 -05:00
Ahmed Awan 937c8489c5 update url when an added path is removed 2025-03-24 13:09:06 -05:00
Ahmed Awan 91665975a0 show path in FormDirectory 2025-03-24 13:09:06 -05:00
Ahmed Awan f88bf02348 Decode/encode FormDirectory paths to allow spaces (and other characters) 
Fixes https://github.com/galaxyproject/galaxy/issues/19812
 2025-03-24 13:09:06 -05:00
Ahmed Awanandmvdbeek b0a448a5b8 use itemUniqueKey instead of just id because those aren't unique 
Co-authored-by: mvdbeek <m.vandenbeek@gmail.com>
 2025-03-24 13:05:03 -05:00
Ahmed Awan e7fe2f0a7e improve drag and drop typing in FormData, fix multi drop 
This adds `HistoryOrCollectionItem` typing to `FormData` and also fixes the bug with multiple item drag-drop not working.
 2025-03-24 12:25:57 -05:00
Ahmed Awan 09526e446f [24.2] Fix drag and drop for dataset collection elements 2025-03-24 12:15:00 -05:00
mvdbeek 1545945986 Lazy-load invocation step jobs as needed 
Fixes https://github.com/galaxyproject/galaxy/issues/19876
 2025-03-23 16:03:00 +01:00
Ahmed Awan add040ebb6 change multiselect current option highlight to darkened secondary 2025-03-20 13:19:51 -05:00
Ahmed Awan 0f0b8fe49b change multiselect current option highlight to success from danger 2025-03-20 12:30:21 -05:00
Ahmed Awan 2b29c6666b add explicit track by id functionality to FormSelect 2025-03-20 11:57:40 -05:00
John Davis b588b27449 Fix default ordering for admin UI 2025-03-19 20:17:06 -04:00
Ahmed Awan df2ff299c2 [24.2] Add spacing between workflow author and invocation count 
Fixes https://github.com/galaxyproject/galaxy/issues/19848
 2025-03-19 11:20:47 -05:00
Ahmed Awan 165cff939f ensure item is checked if selected and is an object with id 2025-03-19 10:21:26 -05:00
John Davis a49d031b57 Do not reorder options in FormSelect component when multiselect disabled 2025-03-18 13:05:13 -04:00