Commit Graph
1422 Commits
Author SHA1 Message Date
Ahmed Awan 5ebbca6c86 Improving Window Manager tour so that it waits for state=ok 2022-08-22 18:03:21 -04:00
David López fff7d7f0fa Merge pull request #14437 from reid-wagner/history_contents_fix
Fix path for history contents API request.
2022-08-12 10:21:52 +02:00
Reid Wagner dd0c992a2a Fix path for history contents API request. 2022-08-11 11:48:05 -05:00
Laila Los 5e6ec168ca update history tour to use data-description 2022-08-10 12:07:12 +02:00
Dannon 574c8f8174 Merge pull request #14358 from hexylena/fix-tool-encoding
[22.05] Fix handling + encoding of spaces in tool names
2022-08-04 21:35:49 -04:00
Helena Rasche 11f511feac Fix handling + encoding of spaces in tool names 2022-07-21 12:30:57 +02:00
davelopez 9feebb88cb Fix tours selectors
The buttons are now considered links so better use the class to select them since it will be less prone to change than the title.
2022-07-14 17:07:18 +02:00
Dannon Baker 2d86fb40a8 Drop defunct msa artifacts 2022-07-05 09:55:51 -04:00
Dannon Baker aa9ba99f84 Modernization of restored msa wrapper 2022-07-05 09:48:14 -04:00
Dannon Baker 663f4f9770 MSA visualization fix and future proofing. 2022-07-05 09:39:04 -04:00
Dannon Baker f0e69aaac5 Fix a bug in PCA artifact staging that prevents a plugin rebuild.
Without `-p` mkdir will error out if the path exists, killing the build.
2022-06-22 07:15:37 -04:00
John Chilton 7aa9ac539a Allow static components in tours. 2022-06-20 12:20:00 -04:00
John Chilton 133c22c3a0 Clean up core history tour a bit.
- More concise upload help.
- Icon for deleting datasets changed, updated it here.
2022-06-03 08:57:59 -04:00
John Chilton d35afcdca2 Cleanup tours infrastructure a bit.
- Remove backdrop - it no longer does anything with popper.js.
- Reduce duplication in all the tours by allowing preclick/postclick to just click the element specified by the step.
2022-06-03 08:57:59 -04:00
guerler f165a206a9 Adjust tour generator webhook 2022-05-27 04:42:56 -04:00
guerler 9e33c47abd Fix history tour 2022-05-26 15:32:44 -04:00
guerler dd87b34ffe Fix ui galaxy tour 2022-05-24 13:47:38 -04:00
guerler 59880bc07a Fix testing, routing and window ids in tour 2022-05-24 11:29:29 -04:00
guerler 4f6397f41e Adjust renaming in localization 2022-05-24 10:48:12 -04:00
Dannon 67023b5ec9 Merge pull request #13771 from xtrojak/add_PCA_3D_visualisation
Add 3D PCA visualization
2022-05-02 11:11:11 -07:00
Martin Cech f3c8633f6c add a hack to navigate around FF bug 2022-05-02 15:10:35 +02:00
guerler 23f1509176 Use popper.js instead of bootstrap tours 2022-04-22 11:15:17 -04:00
guerler 1c643a63ff Adjust tours and tour tests to new history, remove final occurance of use_legacy_history 2022-04-21 04:20:33 -04:00
Matej Trojak eaeebb99e0 Create static/dist location 2022-04-20 13:39:34 +02:00
Martin Cech a83be9ab1f move the js dependencies to npm local build 2022-04-20 12:55:35 +02:00
Matej Trojak cc90a8b1af Improved plot styles 2022-04-20 10:19:20 +02:00
Matej Trojak a86e55ab79 Added 3D PCA visualisation 2022-04-19 16:46:15 +02:00
guerler 4e04393b70 Adjust tool tour generator plugin, remove legacy history dependence 2022-04-18 17:09:05 -04:00
Beatriz Serrano-Solano 21e3ba013d Point to GTN tutorial in visualizations readme 2022-03-25 12:06:57 +01:00
Marius van den Beek abdfb23e22 Merge pull request #13616 from beatrizserrano/patch-1
Point to GTN tutorial in visualizations readme
2022-03-25 12:06:32 +01:00
Beatriz Serrano-Solano 3ffa40e2ad Point to GTN tutorial in visualizations readme 2022-03-24 19:47:05 +01:00
mvdbeek 75c27a7300 Fix indentation in additional_template_paths.xml 2022-03-24 19:24:45 +01:00
mvdbeek 3818f50af5 Drop interactive environments 2022-03-23 15:43:24 +01:00
Marius van den Beek 550f47db9e Merge pull request #13540 from mvdbeek/dev
Merge release_22.01 into dev
2022-03-15 11:30:18 +01:00
Björn Grüning 5d958bc1ec Merge pull request #13535 from hexylena/gtn-webhook-autoload
Enable automatically loading webhook based on url
2022-03-14 21:31:24 +01:00
mvdbeek faea1c8211 Merge branch 'release_22.01' into dev 2022-03-14 17:06:49 +01:00
Nicola Soranzo 0c80836c34 Upgrade syntax to Python 3.7
using `ack --type=python -f | grep -v '^tools/' | xargs pyupgrade --py37-plus`

Also more refactoring of Python files in `packages/` .
2022-03-14 14:57:43 +00:00
Helena Rasche c7a17a5837 Enable automatically loading webhook based on url 2022-03-14 12:33:23 +01:00
Dannon Baker c14910231c Fix jqplot_bar import (this was causing a build failure -- was this originally built on a case insensitive system maybe?) 2022-03-07 12:08:34 -05:00
Dannon Baker 623a5e165a Apply black formatting.
Apply isort.
2022-02-03 07:42:20 -05:00
Reid Wagner 71eb4eb65d Update version number. 2022-01-28 13:40:55 -06:00
Reid Wagner 0b538342a0 Store peptide IDs as strings.
These peptide IDs were previously parsed as floats. The result was that
peptides that were too large were rounded, and the ID was no longer
meaningful, resulting in the "PSM Detail for Selected Peptides" table
not being populated.

With this change PEPTIDE_ID field is no longer parsed as a float, and
remains a string.
2022-01-28 13:40:45 -06:00
Dannon Baker 28deb88dd6 Fix routing for tool execution from gtn webhook 2022-01-06 13:13:03 -05:00
Marius van den Beek f57730093c Merge pull request #13118 from dannon/news-gtn-hooks-safety
Webhooks robustification for news and gtn
2022-01-06 17:26:40 +01:00
Dannon Baker c6bcea5a8c For gtn/news frames, ensure frame is engaged prior to dismissal.
Guarding here is simpler than tracking event handlers and making
assumptions.
2022-01-05 08:49:55 -05:00
mvdbeek a677623df3 Fix tour builder for instances with prefix 2022-01-05 13:31:58 +01:00
Dannon Baker b9505426e2 Wrap default webhooks in iifes to prevent global pollution 2022-01-04 22:29:17 -05:00
Dannon Baker 0949d3e01a Delay iframe creation for news until it's actually clicked 2022-01-04 14:21:54 -05:00
davelopez c0134f97d6 Fix broken library datasets links
- Some links to library elements were not replaced with the new library router paths.
- Fix undeleted dataset link in toast message.
2021-12-13 13:46:19 +01:00
guerler 43e80d1fcf Use utilities npm package, remove utilities, fix visualizations 2021-11-13 22:20:07 -05:00