Commit Graph
2863 Commits
Author SHA1 Message Date
guerler 5dec24c21e Merge branch 'dev' of https://github.com/galaxyproject/galaxy into library_data_parameter 2015-04-19 22:59:16 -04:00
guerler ebafd06fea Merge branch 'dev' of https://github.com/galaxyproject/galaxy into library_data_parameter 2015-04-16 20:02:25 -04:00
Carl Eberhard 9ada2f6c43 UI, Histories: improve highlighting of current/active content in current history panel 2015-04-16 16:01:23 -04:00
guerler c40e8f618d Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_validation 2015-04-14 03:01:33 -04:00
guerler 5c8ad19ddb New library data selector for tool form 2015-04-14 02:27:38 -04:00
James Taylor d323fa0aad Change Emory to Johns Hopkins in sample welcome. 2015-04-13 17:21:52 -04:00
guerler c1bf66b9b0 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into revise_validation
Conflicts:
	lib/galaxy/tools/__init__.py
	static/maps/mvc/form/form-view.js.map
	static/scripts/mvc/form/form-view.js
2015-04-10 19:59:56 -04:00
John Chilton e09fc21e6c Merge pull request #104 from guerler/revise_default_values
Fix default value handling in new tool form
2015-04-10 07:56:14 -05:00
John Chilton 38b06a704b Merge pull request #35 from guerler/tool_form_section_tag
Tool form section tag
2015-04-10 07:52:37 -05:00
guerler 182fac5ad6 Re-insert classic tool form 2015-04-10 01:07:36 -04:00
guerler 3ff5204801 Fix default tool parameter value handling in current form 2015-04-09 22:44:16 -04:00
guerler e625190219 Fix default value handling in new tool form 2015-04-09 22:18:41 -04:00
Carl Eberhard 237c857f8d UI, Histories: respect subtitle dataset hiding switch and prevent bad autohiding of newly added datasets. 2015-04-09 15:03:31 -04:00
Carl Eberhard fb1048bb09 UI, history multipanel: attempt to solve undefined context in underscore.debounce<-checkColumnsInView by removing context binding 2015-04-09 11:05:34 -04:00
guerler 7f479ff32c WorkflowForm: Use is_workflow instead of is_dynamic for workflow editor 2015-04-09 00:28:37 -04:00
guerler e7b7281be7 WorkflowForm: Convert selection arrays to proper strings 2015-04-08 18:47:10 -04:00
guerler 388587de1c Merge branch 'dev' of https://github.com/galaxyproject/galaxy into tool_form_section_tag
Conflicts:
	lib/galaxy/tools/__init__.py
2015-04-06 12:30:17 -04:00
Carl Eberhard b9fc715dd5 Fix url for DatasetAssociationCollection (and expansion of datasets in dataset-choice.js) 2015-04-02 17:16:46 -04:00
Dannon Baker 9257817afd Strip out unused lunr dependency -- a different approach was pursued for tool searching. 2015-04-01 11:41:15 -04:00
Dannon Baker 3a397ee7d3 Merge circster fix from release_15.03 to dev 2015-03-31 17:39:48 -04:00
Carl Eberhard f7669f3cd6 Fix to ba44452: properly scope mod_icon_btn in define not require 2015-03-31 17:05:50 -04:00
guerler 5aa73d0e05 Merge branch 'dev' into tool_form_section_tag
Conflicts:
	lib/galaxy/tools/test.py
2015-03-26 17:04:29 -04:00
guerler 0279d6010a Repack styles, packing fails sometimes 2015-03-25 22:56:09 -04:00
guerler 49f45d3fce Ui: Add top margin to section element 2015-03-25 22:54:54 -04:00
Martin Cech 9496c9e9a4 Merge branch 'release_15.03' into dev
Conflicts:
	static/scripts/mvc/library/library-dataset-view.js
	static/scripts/mvc/library/library-folder-view.js
	static/scripts/mvc/library/library-foldertoolbar-view.js
	static/scripts/mvc/library/library-library-view.js
	static/scripts/mvc/library/library-model.js
	static/scripts/packed
	static/scripts/packed/mvc/library/library-dataset-view.js
	static/scripts/packed/mvc/library/library-folder-view.js
	static/scripts/packed/mvc/library/library-foldertoolbar-view.js
	static/scripts/packed/mvc/library/library-library-view.js
	static/scripts/packed/mvc/library/library-model.js
2015-03-25 16:33:44 -04:00
Martin Cech d5aeb952ce Merge pull request #37 from martenson/release_15.03
[STABLE] fix libraries to work with proxy prefix
2015-03-25 15:23:17 -04:00
John Chilton f11a3a80fe Add file lost in previous merge (b52e562369). 2015-03-25 14:29:38 -04:00
John Chilton b52e562369 Merge remote-tracking branch 'galaxyproject/release_15.03' into dev
Conflicts:
	client/galaxy/scripts/mvc/tools/tools-parameters.js
	static/scripts/mvc/history/history-model.js
	static/scripts/packed
	static/scripts/packed/mvc/history/history-model.js
	static/scripts/packed/mvc/tools/tools-parameters.js
2015-03-25 14:19:54 -04:00
Carl Eberhard 5ace814041 UI, History: fix model setAsCurrent to use galaxy_config.root proxy prefix 2015-03-24 17:03:59 -04:00
Martin Cech 4f53a85ea1 add root prefix to all ajax calls in data libraries 2015-03-24 14:11:41 -04:00
Martin Cech 9eed7ddb56 add root prefix to all library BB model urls 2015-03-24 11:14:11 -04:00
Carl Eberhard ec89d4c7cf Client: fix to base.js to remove Backbone dependency until we stop loading it via script tag (this should fix a trackster load error where backbone was attempting to reload jquery without a shim) 2015-03-23 18:53:40 -04:00
guerler 6b86b8c86f Parameters: Add expanded attribute to section input parameter 2015-03-23 15:41:32 -04:00
guerler f1c036e746 ToolForm: Add section tag 2015-03-23 15:31:23 -04:00
Carl Eberhard e36e51eeb1 Serializers, History: account for dataset collections when serializing 'empty'; UI, Collections: show deleted and hidden warnings in the list item views 2015-03-20 15:59:52 -04:00
Carl Eberhard 1e55206696 UI, Collections: show deleted and hidden warnings on collection list items 2015-03-20 14:49:57 -04:00
Carl Eberhard 0c796800ea UI, Collections: better validity checking of collection inputs (must be datasets in the ok state), refactoring 2015-03-20 14:25:57 -04:00
Carl Eberhard 535fc9cc07 UI, Collections: add compressed files and maps 2015-03-20 12:40:46 -04:00
Carl Eberhard 51943d4962 UI, Collections: rename badly named paired collection creator, begin moving other creators out to add functionality 2015-03-20 12:39:20 -04:00
Carl Eberhard af15a06ec5 Merge branch 'collections' into dev 2015-03-20 12:23:52 -04:00
Carl Eberhard 87a45aa90b UI, Collections: refactor promoteToHDCA 2015-03-20 12:19:27 -04:00
Carl Eberhard 3f885ddbb5 UI, Collections: minor fixes, cleanup 2015-03-19 10:09:21 -04:00
guerler a8a85ec0f6 ToolForm: Remove unnecessary code 2015-03-19 09:03:14 -04:00
guerler 4f0ba0b545 Form: Use title (as for repeats) instead of label for custom sections 2015-03-19 08:54:30 -04:00
guerler 91396853b7 Unifies and improves the handling of optional select fields 2015-03-19 04:50:35 -04:00
guerler 23ef706cb5 ToolForm: Fix version handling 2015-03-19 04:08:47 -04:00
Carl Eberhard 21d1d6b28e UI, Collections: allow editing of top level collection names, prevent in below-top-level collections (considered immutable for now), minor style fixes 2015-03-18 16:10:37 -04:00
Martin Cech 7d411033e5 prevent the search hint string to enter the searchbox
proper placeholder is used instead
2015-03-18 15:31:02 -04:00
Carl Eberhard 006c373693 Merge branch 'collections' into dev 2015-03-18 12:39:49 -04:00
Carl Eberhard c0e55095da UI, Collections: adding editable collection panels and lis 2015-03-18 11:40:18 -04:00