Nicola Soranzo
9d74bba7fb
Drop support for retired Python 3.5
...
Upgrade syntax using `pyupgrade --py36-plus` .
Manually drop several `six` imports.
Also:
- Remove broken pr_cache in scripts/bootstrap_history.py
- Fix broken prefix removal in lib/galaxy/tool_util/deps/mulled/mulled_build.py
2020-10-07 11:52:13 +01:00
vahid
3798a3d124
Commented-out cloudbridge requirement for the cloud/send tool.
2019-04-12 08:46:46 -04:00
vahid
1aa19ec99b
Update cloud imports to adhere with cloudbridge interface changes.
2019-03-22 14:02:48 -07:00
Enis Afgan
566ffaf9d5
Update send tool help text
2018-11-05 15:53:47 -05:00
vahid
6c07a0370d
Update description on send tool wrapper.
2018-10-31 10:33:03 -07:00
vahid
341f7d6372
Update output label & tool name to compose a more intuitive log label.
2018-10-31 10:31:48 -07:00
vahid
43e5a1828d
In Cloud send tool: surround error raising blocks of code in try-catch.
2018-10-29 11:05:46 -07:00
vahid
7433e2640b
Extend the help section and refactor Authz to Cloud Authorization.
2018-10-28 12:09:23 -07:00
vahid
39bdb67273
Make duplicate object timestamp shorter and use _ instead of -.
2018-10-28 11:39:47 -07:00
vahid
6f56ff10b9
Remove @ & msec from send tool timestamp.
2018-10-28 11:11:51 -07:00
vahid
ef70f20a58
Swap authz_id and bucket; bucket is the first parameter now.
2018-10-28 10:07:50 -07:00
vahid
e30460049f
Remove _ and capitalize each work in "overwrite_existing".
2018-10-28 10:04:34 -07:00
vahid
a236c64ea7
Repalce "sys.exc_info" with "Exception as e" in cloud Send tool wrapper.
2018-10-25 20:48:06 -07:00
vahid
d4d659a851
Replace the hardcoded msg with the exception msg in the cloud send tool.
2018-10-25 13:23:18 -07:00
vahid
8c95f174ba
Fix lint issues.
2018-10-24 21:45:46 -07:00
vahid
8543231b40
Surround getting cloudauthz cred. in Send tool in a try-catch block.
2018-10-24 21:21:45 -07:00
vahid
47b41d1bb0
Add timestamp, and transfer ET & rate to the Send to cloud tool's log.
2018-10-23 16:27:13 -07:00
vahid
8f11f78aa2
download > send refactoring in the tool.
2018-10-16 12:30:00 -07:00
vahid
b62e0476be
cloud Download > Send refactoring in tool wrapper, & related places.
2018-10-16 12:28:42 -07:00
vahid
01a124314d
Rename cloud/download.* to cloud/send.*
2018-10-16 12:25:12 -07:00
vahid
e943ec2bb4
Rename cloud download tool log dataset.
2018-10-15 10:43:13 -07:00
vahid
3ce2a35647
Update print func syntax in cloud download tool to adhere with py3 req.
2018-10-15 10:40:55 -07:00
vahid
847f66340d
Remove a comment from download tool wrapper.
2018-10-11 13:42:51 -07:00
vahid
4305e2c56c
Add some logging steps in the cloud download tool.
2018-10-11 13:18:12 -07:00
vahid
6504fe6ef1
Always pass user_id as int to authnz/managers so to avoid check & cast.
2018-10-11 09:55:35 -07:00
vahid
9eabf5c6c6
Only download tool wrapper creates tmp credentials tmp file.
2018-10-10 23:42:33 -07:00
vahid
1efa294198
Encode and decode authnz id in download tool wrapper & manager.
2018-10-10 23:35:31 -07:00
vahid
8cd1b0e118
Remove hidden credentials_file arg from download tool wrapper.
2018-10-10 23:24:39 -07:00
vahid
d9baf394d5
Cloud download tool: don't create cred. files if manager has provided.
2018-10-10 23:03:22 -07:00
vahid
b3a12919ca
Update download tool wrapper to leverage tmp credentials in tmp file.
2018-10-10 20:51:11 -07:00
vahid
81eabec6e6
Update cloud download to adhere with cloudbridge v1 interface changes.
2018-10-10 20:47:51 -07:00
vahid
cf919d7bef
Do not assert provider name in cloud download tool.
2018-10-10 20:46:23 -07:00
vahid
9cf7cf6b1e
In the cloud download tool, accept credentials via a tmp file only.
2018-10-10 20:45:33 -07:00
vjalili
4d73ea6a6e
Add azure storage account & resource group to the download tool wrapper.
2018-08-08 14:25:50 -07:00
vjalili
909c7a72d6
Add storage account and resource group as required args for Azure.
2018-08-08 14:22:50 -07:00
vjalili
2528c83bf2
Add docs to the download-to-cloud tool.
2018-08-08 13:59:22 -07:00
vjalili
9de5927b5b
Rename the label of the output of the download-to-cloud.
2018-08-08 13:49:35 -07:00
vjalili
b5cbaaecbc
Fix some lint issues.
2018-08-08 13:40:39 -07:00
vjalili
1dd62afa7f
Fix some lint issues.
2018-08-08 13:38:48 -07:00
vjalili
0aae050595
In the download-to-cloud tool, replace blank space in hda name with _.
2018-08-08 13:23:19 -07:00
vjalili
8502dc5b61
In the wrapper of download-to-cloud tool, hide object_label.
2018-08-08 13:06:51 -07:00
vjalili
35eabd5543
In the download-to-cloud tool, set object_label to hda.name.
2018-08-08 13:05:56 -07:00
vjalili
6c710ed85f
Fix a bug defining provider credentials in the download-to-cloud tool.
2018-08-05 17:09:15 -07:00
vjalili
b4950a9678
The Download-to-cloud tool now reads provider-specific credential args.
2018-08-05 16:19:50 -07:00
vjalili
13aa6be720
Add a comment.
2018-08-05 15:51:11 -07:00
vjalili
6c62cc57eb
Refactor the parser function in the download-to-cloud tool.
2018-08-03 15:11:57 -07:00
vjalili
ef0dbb2931
Implement a args parser function in the download-to-cloud tool.
2018-08-03 15:05:45 -07:00
vjalili
f8ee1c1614
Update args list in the download.py.
2018-08-03 14:53:28 -07:00
vjalili
b60246c8e1
Pass credentials args based on the selected provider.
2018-08-03 14:52:09 -07:00
vjalili
a9dc89e5aa
Download tool wrapper now takes provider-specific credentials.
2018-08-03 13:53:04 -07:00
Nicola Soranzo