 Jeremy Goecks
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acd0a5d6ec
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Circster: support data indexing and loading for datasets not previously indexed. Also add visual indicator when drawing/loading tracks.
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2012-10-11 10:31:13 -04:00 |
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Carl Eberhard
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8a8c21d482
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scatterplot.js: minor changes; data_providers/basic.py: ensure numeric stats only on numeric columns;
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2012-10-11 10:24:43 -04:00 |
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Carl Eberhard
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d9747a836f
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scatterplot: added stats panel, added chart config panel; dataproviders/basic.py: compute, pass gen. stats in response.meta; base-mvc: fixed bug in chrome LoggableMixin; pack scripts
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2012-10-10 17:55:34 -04:00 |
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Carl Eberhard
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6c39691ecf
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history.js: fix to HistoryView tagging functionality
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2012-10-09 19:10:30 -04:00 |
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Jeremy Goecks
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c2f30dbef9
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Trackster: accurately calculate track/tile heights by clearing previously set height before calculating new height.
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2012-10-09 11:33:02 -05:00 |
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Jeremy Goecks
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b1108b2c00
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Fixes that (a) simplify data providers framework and (b) make it possible to view different trees in the same nexus file.
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2012-10-08 22:33:03 -05:00 |
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Carl Eberhard
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4c77381efe
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history.js: add persistant storage, show prev. opened datasets on page refresh; base-mvc.js: add PersistantStorage object adapter
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2012-10-08 13:27:11 -04:00 |
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Jeremy Goecks
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f0ef51b957
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Enable circster to accept a dataset to add to visualization. Also, make visualization creation more flexible and some small refactoring for JS visualization objects.
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2012-10-05 16:01:55 -04:00 |
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Jeremy Goecks
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f511605311
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Pack scripts and add compiled template.
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2012-10-04 12:35:16 -04:00 |
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Jeremy Goecks
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23a6d04b9c
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(a) JSLint cleanup for phyloviz.js and (b) make phyloviz, scatterplot available.
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2012-10-04 11:07:29 -04:00 |
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Jeremy Goecks
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6487bf6060
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Make Phyloviz into an AMD module and use requireJS for Phyloviz.
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2012-10-04 10:51:10 -04:00 |
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Carl Eberhard
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c2fb1c3861
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scatterplot: controls to client-side template
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2012-10-02 17:29:06 -04:00 |
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Carl Eberhard
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25010754f3
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basic.py, ColumnDataProvider: altered return format to be array of column arrays (opposed to array or rows); compute min, max of each column on server; scatterplot: altered to use that format;
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2012-10-02 16:37:45 -04:00 |
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Carl Eberhard
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49d62fe354
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scatterplot: improved adj. for varying y-axis sizes; pack scripts
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2012-10-02 15:36:56 -04:00 |
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Carl Eberhard
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1639f3ffaf
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scatterplot: loading indicators; api/datasets: minor cleanup;
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2012-10-02 13:24:26 -04:00 |
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Jeremy Goecks
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69109c9d09
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Circster: show more data when zoomed in.
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2012-10-02 11:17:22 -04:00 |
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Jeremy Goecks
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d874f3225e
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Fix some UI framework issues.
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2012-10-01 22:53:21 -04:00 |
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Carl Eberhard
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5502bccd54
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fixes and improvements to (alt)history - now renders history controls; fix to popupmenu parent parameter; pack scripts
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2012-10-01 18:25:35 -04:00 |
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James Taylor
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733b90c975
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Always show the tool search box, remove cog from tool menu header, tweak style for clear search button
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2012-09-28 13:13:34 -04:00 |
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Jeremy Goecks
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992669d816
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Viz/UI framework fixes and enhancements. Pack scripts and add new packed scripts.
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2012-09-28 12:07:56 -04:00 |
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Jeremy Goecks
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93744207e9
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Move add_datasets method to tracks module to prevent circular dependency.
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2012-09-27 17:54:35 -04:00 |
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Jeremy Goecks
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337b9938b0
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Viz framework: (a) fix embedded visualizations and (b) bookmarking.
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2012-09-27 17:35:04 -04:00 |
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Carl Eberhard
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7034ba0588
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history.js: fixed download popupmenu, display apps rendering added; ColumnDataProvider: if a line contains a column value that doesn't match the column type None is returned in it's place (prev. returned string)
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2012-09-27 16:25:04 -04:00 |
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Jeremy Goecks
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91273af4b1
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Circster: add chromosome labels and some refactoring.
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2012-09-27 13:36:34 -04:00 |
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Carl Eberhard
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48852ffb74
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compile_templates.py: handle multi-template files better; (alternate_)history: fix download popup menus
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2012-09-26 17:42:45 -04:00 |
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Jeremy Goecks
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e788315e30
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Fixes for ReferenceTracks to make compatible with recent refactoring.
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2012-09-25 10:52:28 -04:00 |
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Jeremy Goecks
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dde34357f4
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Viz framework: (a) improvements in setting dataset type when returning infomation; (b) transition Circster to use GenomeDataManager rather than custom data structures.
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2012-09-25 09:18:00 -04:00 |
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Carl Eberhard
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99b007a266
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scatterplot: add require.js
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2012-09-24 13:47:23 -04:00 |
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Jeremy Goecks
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479de769d2
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Circster: add support for drawing a generic quantitative track and draw summary tree data using a single path.
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2012-09-21 17:44:41 -04:00 |
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Carl Eberhard
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ff3f630b03
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fixed(?) weird permissions on jquery-ui; scatterplot: major adjustments;
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2012-09-21 16:42:29 -04:00 |
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Jeremy Goecks
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6fefb40d4b
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Viz framework: (a) push data provider creation to registry to simplify provider creation; (b) fix bugs in filters module naming; (c) enable deeper sampling in BBI data provider.
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2012-09-21 14:00:09 -04:00 |
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Jeremy Goecks
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95b945b184
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Place track filters in their own file.
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2012-09-21 11:14:56 -04:00 |
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Jeremy Goecks
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75f936db5f
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Add requireJS support for data, visualization, tools and update dependencies.
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2012-09-21 10:12:01 -04:00 |
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Jeremy Goecks
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53f26307c2
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Add utility function to circster that determines whether an element is visible.
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2012-09-20 15:39:57 -04:00 |
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Jeremy Goecks
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1dd49b9ed4
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Circster: render wiggle data as a single path rather than many small paths.
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2012-09-19 18:31:30 -04:00 |
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Jeremy Goecks
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7bd55e2928
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Wrap Sweepster in a requireJS module and add needed module qualifications. Pack scripts.
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2012-09-18 16:50:45 -04:00 |
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Jeremy Goecks
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49632eab74
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Fix bugs in Trackster refactoring.
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2012-09-18 13:48:06 -04:00 |
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James Taylor
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a4216b5a74
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pack
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2012-09-17 16:24:27 -04:00 |
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James Taylor
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d8dac5bfcc
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trackster: moving more stuff out of mako into javascript
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2012-09-17 16:24:13 -04:00 |
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James Taylor
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bb08862dc6
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pack scripts
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2012-09-17 16:15:09 -04:00 |
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James Taylor
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8fbf7a3b0a
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trackster: misc fixes and reorganization
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2012-09-17 16:14:52 -04:00 |
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James Taylor
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3fa6a8ab4e
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trackster fixes
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2012-09-17 15:36:11 -04:00 |
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James Taylor
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2297b49262
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trackster: adding packed scripts
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2012-09-17 15:23:45 -04:00 |
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James Taylor
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e6ce7b2895
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trackster: merge
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2012-09-17 12:06:02 -04:00 |
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James Taylor
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207ec0bf6f
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trackster: starting to split tackster up and load using require.js
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2012-09-17 11:49:31 -04:00 |
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Jeremy Goecks
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76fcd6c852
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Trackster and sweepster fixes for vis framework refactoring.
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2012-09-16 10:57:30 -04:00 |
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Jeremy Goecks
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ba70f84b8e
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Bug fixes for changeset 6243b992762c that enable tools to be run in Trackster. Also add URL to all datasets and pack scripts.
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2012-09-15 17:06:36 -04:00 |
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Jeremy Goecks
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dd668184dc
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Viz framework refactoring: remove tracks controller, moving code that handles data requests to the API and code that manages track browsers to visualization controller.
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2012-09-15 16:08:41 -04:00 |
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Jeremy Goecks
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5902d7da23
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Viz framework refactoring: move visualization view methods into base class and move chromosome/reference data methods to API.
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2012-09-14 17:57:07 -04:00 |
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Jeremy Goecks
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f4a430961c
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Fixes for controller mixin hierarchy. Move track config response from tracks controller to API datasets controller.
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2012-09-14 17:03:11 -04:00 |
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