 Nicola Soranzo
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0c931235af
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Change all remaining old-style classes to new style
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2018-09-17 12:26:07 +01:00 |
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Nicola Soranzo
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326a564eb9
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Stop shipping old BeautifulSoup library
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2018-03-07 01:19:55 +00:00 |
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Nicola Soranzo
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14259b11d9
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Python3: finish first pass on whole codebase
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2017-12-14 12:01:01 +00:00 |
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Nicola Soranzo
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48aca7dce8
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Update to flake8-import-order 0.16
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2017-12-01 11:09:57 +00:00 |
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Nicola Soranzo
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9b4de72ca6
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Fix all E722 errors and ignore E741
Introduced in flake8 3.5.0
Fix import order.
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2017-10-24 11:29:09 +01:00 |
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Nicola Soranzo
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b956406c4d
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Fix Python3 compatibility and import order for 21 files
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2017-10-16 19:43:01 +01:00 |
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Nicola Soranzo
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d1bc98dfcb
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Python3: fix remaining print statements
Remove some debugging prints.
Fix import order.
Consolidate exception logging in ToolShed database migrations.
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2017-10-12 18:34:29 +01:00 |
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Nicola Soranzo
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9b1832abb1
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Fix import order for cron/, scripts/ and test/
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2017-09-25 23:44:39 +01:00 |
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E Rasche
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290971ca7a
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more review comments
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2017-09-25 11:39:15 +02:00 |
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E Rasche
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9b8e76f9d9
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Convert urllib to requests
Which has built-in protection against urls like "file:///tmp/a"
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2017-09-25 11:39:13 +02:00 |
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Nicola Soranzo
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a8d7b2df8b
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Fix more indentation errors
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2017-08-17 11:35:39 +01:00 |
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Nicola Soranzo
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a353b2e88f
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Fix E127 errors introduced by previous commit
using:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E127 .
```
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2017-08-17 11:35:39 +01:00 |
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Nicola Soranzo
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21b44bf348
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Fix all E201 and E202 style errors
using the following command:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E201,E202 .
```
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2017-08-17 11:35:39 +01:00 |
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Nicola Soranzo
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1d17a29c79
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Fixes for pycodestyle 2.2.0
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2016-11-15 16:56:50 +00:00 |
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Nicola Soranzo
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6ba6f798ec
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Fix more E203 flake8 errors
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2016-05-17 23:53:16 +01:00 |
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Nicola Soranzo
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8a43b2b492
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Python 3: use "as" instead of comma in except clause
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2016-05-17 23:53:16 +01:00 |
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Nicola Soranzo
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93348e7199
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Fix the remaining 1334 flake8 errors in scripts/ . Close #391.
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2016-02-18 15:45:15 +00:00 |
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Nicola Soranzo
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cc9b0bed85
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Fix all E712 errors. Standardize sqlalchemy imports.
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2015-07-14 20:49:34 +01:00 |
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Dannon Baker
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dba89dff83
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Convert everything from elementtree to stdlib xml module.
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2015-01-29 16:10:56 -05:00 |
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Greg Von Kuster
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af3b0669aa
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Eliminated all Python2.4 references, added necessary assert statements to ensure minimum version of Python 2.4.
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2008-03-28 15:24:50 +00:00 |
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Daniel Blankenberg
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254077c4e3
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Add scripts required to fetch and process data for the Microbial Genome Datasource Tool.
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2008-03-27 15:36:13 +00:00 |
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