Commit Graph
19 Commits
Author SHA1 Message Date
mvdbeek 8be1ac07e6 Merge branch 'release_20.01' into dev 2020-05-05 21:04:03 +02:00
mvdbeek f6a79f6341 Rename galaxy.util.logging to galaxy.util.custom_logging
Otherwise there may be import issues:
```
==================================== ERRORS ====================================

________________________ ERROR collecting test session _________________________

.tox/py27-unit/lib/python2.7/site-packages/py/_path/common.py:383: in visit

    for x in Visitor(fil, rec, ignore, bf, sort).gen(self):

.tox/py27-unit/lib/python2.7/site-packages/py/_path/common.py:425: in gen

    if p.check(dir=1) and (rec is None or rec(p))])

.tox/py27-unit/lib/python2.7/site-packages/_pytest/main.py:667: in _recurse

    ihook = self.gethookproxy(dirpath)

.tox/py27-unit/lib/python2.7/site-packages/_pytest/main.py:482: in gethookproxy

    my_conftestmodules = pm._getconftestmodules(fspath)

.tox/py27-unit/lib/python2.7/site-packages/_pytest/config/__init__.py:424: in _getconftestmodules

    mod = self._importconftest(conftestpath.realpath())

.tox/py27-unit/lib/python2.7/site-packages/_pytest/config/__init__.py:463: in _importconftest

    raise ConftestImportFailure(conftestpath, sys.exc_info())

E   ConftestImportFailure: (local('/home/circleci/repo/test/unit/queue_worker/conftest.py'), (<type 'exceptions.AttributeError'>, AttributeError("'module' object has no attribute 'getLogger'",), <traceback object at 0x7fabd96b7eb0>))

----- generated html file: file:///home/circleci/repo/run_unit_tests.html ------

!!!!!!!!!!!!!!!!!!! Interrupted: 1 errors during collection !!!!!!!!!!!!!!!!!!!!

=========================== 1 error in 1.83 seconds ============================

```
2020-05-03 21:50:12 +02:00
mvdbeek 0639e4885e Add requests requirement for galaxy-util 2020-04-27 13:53:10 +02:00
John Chilton 7890be518c Starting work on util 20.1.0.dev1 2020-01-13 23:03:48 -05:00
John Chilton 0bebd6c037 Prep next release galaxy-util, galaxy-tool-util (20.1.0-dev0). 2020-01-13 22:53:18 -05:00
John Chilton 073624557c Starting work on util 19.9.1 2019-11-21 09:43:16 +01:00
John Chilton 13d61a7286 Version 19.9.0 of util (tag galaxy-util-19.9.0). 2019-11-21 09:39:59 +01:00
dglaetzer 560565b4e6 link maf_utilities back to it's original directory, fix requirements 2019-07-07 10:56:17 +02:00
Nicola Soranzo 1b6be605b8 Fix imports 2019-07-06 17:40:13 +02:00
dglaetzer 0ca1550903 Merge remote-tracking branch 'upstream/dev' into dev 2019-07-06 16:50:11 +02:00
damian 54d2ca01f8 moved common_util.py, encoding_util.py and xml_util.py from tool_shed/util to galaxy/util/tool_shed (for data package) 2019-07-06 13:58:52 +02:00
Nicola Soranzo 1c292702ca Update PROJECT_EMAIL and PyPI URL for old packages 2019-07-05 16:41:11 +02:00
John Chilton ba18783511 Publish universal wheels for various packages.
- Starting work on job-metrics 19.9.0.dev2
- Starting work on objectstore 19.9.0.dev2
- Starting work on util 19.9.0.dev3
- Starting work on tool-util 19.9.0.dev2
2019-06-05 16:44:34 -04:00
John Chilton d7e08adeeb Work on galaxy-util optional dependencies. 2019-06-05 16:44:34 -04:00
John Chilton 905a40d090 packages/ - update package versions to reflect pre-releases to PyPI. 2019-05-28 16:14:50 -04:00
John Chilton a49debffdc packages/ - add Makefile(s) for building projects.
Uses a stripped down, updated variant of like Pulsar/Planemo/ephemeris Makefile stuff. Modified in dozens of ways for tags, version and path differences, etc.. Symbolic links to keep everything in line.
2019-05-28 16:13:07 -04:00
John Chilton 93d097185c packages/ - add development requirements for publishing, linting artifacts 2019-05-28 16:13:07 -04:00
John Chilton 72c22f9610 packages/ - improvements to project structures.
- Update setup.py to reflect Galaxy no longer supports Python 3.4.
- Move PROJECT_DESCRIPTION into a variable imported into setup.py dynamically, reducing the differences in setup.py across packages.
- Fix some project descriptions.
- Fix versions and HISTORY.rst for a release this cycle, didn't get any 19.5.0 packages out.
2019-05-28 16:12:54 -04:00
John Chilton 59b41f4bc3 Rename projects/ -> packages/.
https://github.com/galaxyproject/galaxy/pull/7524#issuecomment-477529349
2019-03-28 09:17:51 -04:00