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39c1908a0a3ef2a2e8a8213e5361320409e7c547
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18 Commits
Author SHA1 Message Date
Nicola Soranzo 29cf68f0b0 Do not encode a rendered Mako template 
Fix 1 error and 2 failures in unit tests under Python 3, e.g.:

```
FAIL: test_render (unit.visualizations.plugins.test_VisualizationPlugin.VisualizationsPlugin_TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/build/galaxyproject/galaxy/test/unit/visualizations/plugins/test_VisualizationPlugin.py", line 180, in test_render
    self.assertIsInstance(response, string_types)
AssertionError: b'\nTrue\n' is not an instance of (<class 'str'>,)
```
 2018-07-01 00:19:00 -07:00
guerler d288b3baa8 Adjust test cases 2018-03-30 15:56:37 -04:00
guerler 7afecf9d1a Fix test cases 2018-03-09 15:29:31 -05:00
Nicola Soranzo 2cd95c48f6 Fix import order everywhere 
- Add flake8-import-order to flake8 Pipfile and remove py27-lint-imports
  and py27-lint-imports-include-list tox envs
- Fix most E201 and E202 errors reported by flake8-import-order v0.15,
  but pin flake8-import-order to v0.14.3 until
  https://github.com/PyCQA/flake8-import-order/issues/123
  is fixed

This let us drop 2 jobs on Travis per each job.
 2017-11-14 19:42:39 +00:00
Nicola Soranzo d1bc98dfcb Python3: fix remaining print statements 
Remove some debugging prints.
Fix import order.
Consolidate exception logging in ToolShed database migrations.
 2017-10-12 18:34:29 +01:00
Nicola Soranzo 9b1832abb1 Fix import order for cron/, scripts/ and test/ 2017-09-25 23:44:39 +01:00
Nicola Soranzo 21b44bf348 Fix all E201 and E202 style errors 
using the following command:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E201,E202 .
```
 2017-08-17 11:35:39 +01:00
Anne Fouilloux 93da60c48e Changed ipython with jupyter 
not only for converting jupyter notebook to HTML (with nbconvert) but also
where ipython/IPython was referenced.

Some files still contain ipython but this is mostly related to documentation or
to the IE docker container itself.
 2016-12-12 14:26:58 +01:00
Nicola Soranzo a8746c4f52 Fix import order and Python3 compatibility for test/unit/ 2016-11-16 10:29:09 +00:00
Nicola Soranzo 1d17a29c79 Fixes for pycodestyle 2.2.0 2016-11-15 16:56:50 +00:00
Nicola Soranzo 9a97a2952f Python3: test/unit/ 2016-06-29 01:55:44 -04:00
Nicola Soranzo 6ba6f798ec Fix more E203 flake8 errors 2016-05-17 23:53:16 +01:00
Nicola Soranzo 8a43b2b492 Python 3: use "as" instead of comma in except clause 2016-05-17 23:53:16 +01:00
Nicola Soranzo 34d9388456 Use os.pardir everywhere instead of '..' . 2015-07-14 16:20:29 +01:00
Carl Eberhard d675a6a0b3 Testing: use unittest2 to allow 2.7 assertions 2015-05-07 17:50:56 -04:00
Martin Cech d28ea45556 Merge branch 'release_15.05' into dev 
Conflicts:
	config/plugins/visualizations/common/templates/script_entry_point.mako
 2015-05-07 13:09:24 -04:00
John Chilton 04bc0b2111 Fix assertions in test_VisualizationsRegistry.py... 
...that were implicitly assumed fixed Python hashing.
 2015-05-06 14:12:25 -04:00
Carl Eberhard 7fd6cc3704 Visualization registry: move tests into directory matching lib/galaxy/visualization/plugins 2015-04-29 13:46:51 -04:00