tmcgowan
38464b5b28
Originating workflow must be unchanged, load save as workflow to editor on save.
2016-10-18 16:06:16 -05:00
tmcgowan
1288cf0505
Add workflow save-as functionality. Issue 3000
2016-10-11 11:10:08 -05:00
Nicola Soranzo
1e32c0926c
Fix import order and Python3 compatibility for most of test/
2016-10-10 19:06:22 +01:00
Nicola Soranzo
a2ee8d10af
Merge branch 'release_16.07' into dev
...
Conflicts:
doc/source/admin/conda_faq.rst
static/maps/mvc/ui/ui-modal.js.map
static/scripts/bundled/libs.bundled.js
static/scripts/bundled/libs.bundled.js.map
static/scripts/mvc/ui/ui-modal.js
2016-10-05 20:34:50 +01:00
guerler
b595cd3f47
Always submit either history_id or new history name through run form
2016-10-04 22:36:16 -04:00
guerler
329ee05251
Hide children elements instead of destroying them upon successful workflow submission
2016-10-04 12:36:52 -04:00
guerler
0b03a800ab
Improve error display robustness for run workflow form
2016-10-03 09:50:48 -04:00
guerler
d5c54907da
Rename step_id to step_index to avoid confusion, fix error message response handling
2016-10-03 09:45:06 -04:00
guerler
ce7cf6cc23
Rename step_id to step_index to avoid confusion
2016-10-03 08:21:45 -04:00
guerler
0f6ad3f414
Use order index to link connected datasets
2016-10-03 08:17:58 -04:00
John Chilton
b106c48b68
Unify build_workflow_run_configs for API and UI approaches to running workflows.
...
No more branches - the method runs top to bottom for each approach. One loop for batching regardless and completely available to all API options. Only call WorkflowRunConfig in one place. Remove duplicate fetching of replacement_params. One call to _normalize_step_parameters.
2016-09-30 22:54:06 -04:00
guerler
4fea03acc9
Use explicit order_index when assigning workflow steps
2016-09-30 17:07:43 -04:00
guerler
67eb2c6530
Use parameters/batch instead of input_params
2016-09-30 13:17:51 -04:00
guerler
e14fe50643
Use order_index instead of step_id
2016-09-30 00:08:38 -04:00
guerler
1cc8e04c81
Merge all errors from batch mode run for regular tool executions
2016-09-29 13:12:57 -04:00
guerler
e34019e528
Improve invocations success message
2016-09-29 03:15:50 -04:00
guerler
838fad39a1
Add details to error modal
2016-09-26 04:38:55 -04:00
guerler
5095fc02c4
Remove internal api endpoint, merge into invocations endpoint
2016-09-25 12:45:28 -04:00
guerler
2cf7b8ee15
Fix status handling for ajax requests
2016-09-23 06:36:04 -04:00
guerler
42ebe00c06
Add listener to properly clean up deferred form building processes
2016-09-23 06:16:54 -04:00
carlfeberhard
d7ab1c5cfb
UI, Modal: re-build dom on render
...
Moves templating to render (and updates dom node attributes after)
to reset modal and prevent inline styling and other modifications
to the singleton from persisting between calls to show.
2016-09-22 11:38:10 -04:00
guerler
7a736818a6
Avoid inheritance in tool-form view
...
Avoid inheritance for workflow editor form
Fix test cases
2016-09-21 16:51:45 -04:00
guerler
9dc412921e
Fix bottom margin
2016-09-21 13:15:24 -04:00
guerler
1ab673a4ed
Fix padding distance
2016-09-21 13:15:24 -04:00
guerler
80b5e5da91
Remove unused portlet footer
2016-09-21 13:15:24 -04:00
guerler
680e34c1ad
Fix form preview height style
2016-09-21 13:15:24 -04:00
guerler
05b1c98896
Add basic step version changes notification
2016-09-21 13:15:23 -04:00
guerler
a537daa9ed
Move run form model builder to workflow data manager
2016-09-21 13:15:22 -04:00
John Chilton
f553d387a4
Merge pull request #2880 from jgoecks/bbi-js3
...
Trackster: Read numerical data directly from bigwig files
2016-09-15 13:03:08 -04:00
guerler
5483e9f5bf
Fix indention for noscratchbook flag
2016-09-02 12:27:54 -04:00
jgoecks
5518c20a20
Cleanup: (a) remove debugging statements; (b) use Galaxy app; and (c) fix offset issue for LinePainter using floor instead of ceil.
2016-08-31 14:22:36 -04:00
Scott Szakonyi
c09bd5688a
Merge remote branch 'upstream/dev' into dev
2016-08-31 12:55:21 -04:00
jgoecks
7b44cc5470
Merge branch 'dev' into bbi-js3
2016-08-31 12:47:42 -04:00
guerler
a31640c730
Merge branch 'dev' into charts_revision
2016-08-24 17:04:42 -04:00
jgoecks
74be6955b3
Detect whether server has byte-range support and set LineTrack data manager appropriately.
2016-08-24 14:20:26 -04:00
jgoecks
41d0ee4f43
Bring data provided by data manager in line with Trackster's bigwig datatype. Also allow LinePainter to draw regions of variable length.
2016-08-23 16:55:20 -04:00
Dannon Baker
aa41a70011
Fix tabular renderer display when total_cols > line_cols > 1
2016-08-23 16:07:36 -04:00
guerler
d9b8a1674b
Use tabs for chart type selector
2016-08-23 00:56:05 -04:00
guerler
94d6d6f16f
Add developer example
2016-08-22 09:47:13 -04:00
guerler
2073114b68
Generalize group forms
2016-08-21 18:29:19 -04:00
jgoecks
cdc82ef2f8
Merge branch 'dev' into bbi-js3
2016-08-19 17:38:25 -04:00
guerler
8f2bceebff
Rename tools to utilities
2016-08-19 12:39:46 -04:00
guerler
48e3f3c4f7
Use libraries instead of data point sizes to filter list of visualization types
2016-08-19 10:26:35 -04:00
guerler
972c5c0ce0
Revise cloning method
2016-08-19 08:25:28 -04:00
guerler
b23b18c302
Populate input states for settings and group forms
2016-08-19 08:25:25 -04:00
guerler
6698f90145
Map settings when chart type changes
2016-08-19 08:23:48 -04:00
guerler
bda8ba737d
Avoid uneccessary re-rendering of form
2016-08-19 08:23:48 -04:00
guerler
118c397304
Revise color picker, fix settings form
2016-08-19 08:23:47 -04:00
guerler
67b7516615
Revise groups form building
...
Repack
2016-08-19 08:23:47 -04:00
guerler
fb075e15a9
Use regular form definitions for all nvd3 charts
2016-08-19 08:23:46 -04:00
tmcgowan