Commit Graph
183 Commits
Author SHA1 Message Date
Carl Eberhard d26c79c88c Fix to UI modularization & trackster: add mod_icon_btn to the proper closure; Fix to TagManager refactoring: remove trans from tagging_common.mako method calls 2015-01-12 16:06:43 -05:00
Carl Eberhard 90b0fb587a Client build: remove references to ui.js in client and templates; mv scripts/jq-plugins/ui to more generic/catch-all scripts/ui/ 2014-12-09 13:52:24 -05:00
Carl Eberhard ba44452cbe Client build: remove ui.js; modularize icon button from ui.js 2014-12-09 13:28:57 -05:00
Jeremy Goecks 24f0bd01d9 Remove debugging statement. 2014-12-02 13:30:19 -05:00
Carl Eberhard ed0617e438 Phyloviz: fix saving 2014-11-13 11:23:12 -05:00
Jeremy Goecks e7d1acd6d3 Trackster: improve display of allele summaries. 2014-10-24 16:29:53 -04:00
Jeremy Goecks bda44d0daf Trackster: add generic functions to convert from chromosome position to drawing position. Use functions in variant painter. 2014-10-24 15:43:34 -04:00
Jeremy Goecks d1eabea652 Trackster: better drawing of deletions in variant tracks. Initial parsing of insertions. 2014-10-24 15:04:06 -04:00
Jeremy Goecks d7552ee11d Fix Circster background bug in Firefox by correctly specifying colors. 2014-10-16 14:15:50 -04:00
John Chilton a5ccac592b Attempted merge of next-stable into default.
Looks correct to me - but let me know if I broke something.
2014-10-02 22:03:39 -04:00
Jeremy Goecks c11e61acbd Trackster: make comparisons explicit when testing for track statistical data. 2014-09-30 13:20:52 -04:00
Jeremy Goecks 3258a3359f Enable Trackster visualizations to be added to Scratchbook via dynamic loading rather than iframes. 2014-09-29 17:12:03 -04:00
Jeremy Goecks f0592c1656 Remove references to global var. 2014-09-29 12:24:51 -04:00
John Chilton 62f0d9da61 Merge latest stable. 2014-08-25 15:35:45 -04:00
Carl Eberhard d3b51aea39 UI, History: add copy method to model; fill out history collection; pack scripts 2014-08-15 09:58:15 -04:00
Jeremy Goecks 80de8c1226 Trackster: fix display of overlapping reads by correctly resolving read length regardless of data loading/tile drawing order. Unfortunately, the easiest way to accomplish this required refactoring, hence the large commit. Pack scripts. 2014-08-13 17:25:35 -04:00
Jeremy Goecks fde948ff4d Trackster: fix location of gap line and read-pair connector line. 2014-08-11 11:18:46 -04:00
Jeremy Goecks 163866b06e Trackster: refine label track position calculation. 2014-08-09 15:38:33 -04:00
Jeremy Goecks 870f3c4e51 Trackster: stabilize tile boundary calculations so that tiles do not overlap or yield visual artifacts. 2014-08-06 10:28:01 -04:00
Jeremy Goecks f158a4e447 Trackster: fix single-pixel gap bug in quantitative track display. 2014-08-04 14:50:28 -04:00
Jeremy Goecks 244d861077 Trackster: remove visual artifact resulting from overlapping tiles when zoomed in at the base level. Pack scripts. 2014-08-03 15:57:04 -04:00
John Chilton f53fd0310a Pack scripts for recent commits. 2014-07-28 14:59:38 -04:00
Carl Eberhard de12ab8aa9 History/Collection/HDA MVC: refactoring; Base MVC: create mixin shortcut to extend, use with HistoryContentMixin; Pages: allow display of collections; HDAs: fix annotation default overwriting existing when only partial model is saved; Style: begin separation of collections styles and prep for DOM class renaming; pack scripts 2014-07-23 12:59:04 -04:00
Jeremy Goecks 19edf28795 Trackster: merge all top-level UI code into the same file for simplicity. 2014-07-17 16:23:17 -04:00
Carl Eberhard 68d7a31a75 History panel: refactoring for dataset collections 2014-07-09 13:40:43 -04:00
Aysam Guerler 9c15798dfa Fix for grids, pack scripts 2014-07-02 16:05:41 -04:00
Jeremy Goecks dc20caec65 Circster: add config options for min/max values and color. 2014-06-26 10:56:05 -04:00
Nate Coraor c6c6be08f4 Merge stable. 2014-06-26 09:11:36 -04:00
Jeremy Goecks a35fc2a598 Pack script. 2014-06-26 08:49:37 -04:00
Aysam Guerler 4d241eb79a Updated UI elements and styles, added zoomable charts 2014-05-30 21:42:28 -04:00
Carl Eberhard e82a1ad9af HDA view: properly compile underscore template on first load, override template fn to pass localizer (_l) into template fn 2014-05-28 13:41:07 -04:00
Martin Cech 479337bd56 data libraries: default sorting; cleanup; refactor; jslint; start on getting rid of modals for library/folder creation 2014-04-23 17:31:01 -04:00
Jeremy Goecks 26051b1957 Trackster: move browser routing into TracksterView so that hash-based location routing works for both private and shared visualizations. 2014-04-17 09:47:41 -04:00
Carl Eberhard f47f539d43 pack scripts 2014-04-11 16:41:45 -04:00
Jeremy Goecks 28ddf4bcc2 Updates to Sweepster to get it working again. 2014-04-10 17:21:00 -04:00
Jeremy Goecks 9d64557de5 Trackster: update jQuery selector so that all tool inputs are updated on change rather only <input> elements. Pack script. 2014-04-08 12:07:50 -04:00
Jeremy Goecks 910fc94c94 Pack script. 2014-04-07 12:22:01 -04:00
Jeremy Goecks 086e37c557 Trackster: only draw incomplete features when displaying features, not coverage data. Pack script. 2014-04-04 16:33:06 -04:00
Jeremy Goecks 18c2e3fc71 Trackster: fixes for creating and resizing composite line tracks. 2014-04-03 14:33:48 -04:00
Jeremy Goecks 579ebf5157 Circster fixes: (a) make compatible with new config object; (b) fix formatting issue with negative values; and (c) clean up debugging statements. Pack scripts. 2014-04-02 10:15:54 -04:00
Jeremy Goecks fee4cb7333 Trackster: CompositeTrack fixes for recent refactoring. Pack script. 2014-04-02 09:12:07 -04:00
Jeremy Goecks 573456d475 Trackster: show drawn reads across all tiles by pooling incompletely drawn reads and drawing them at the end. 2014-04-01 16:21:32 -04:00
Jeremy Goecks e2f56b50f2 Trackster: drawing performance improvement. Packed scripts. 2014-04-01 15:09:30 -04:00
Jeremy Goecks e329872433 Pack script. 2014-03-26 22:15:12 -04:00
Jeremy Goecks ebaa1c39d3 Visualization JS: fix incorrect method call. Pack script. 2014-03-26 17:53:07 -04:00
Jeremy Goecks f0e4046998 Pack scripts. 2014-03-26 17:39:58 -04:00
Carl Eberhard 0f131815bf Pages: fix insertion of embedded in webkit browsers; pack scripts 2014-03-18 14:32:33 -04:00
Aysam Guerler 1bbf58ed5d Charts: Style fixes 2014-03-10 02:22:45 -04:00
Carl Eberhard b28d2db33e Return mode fn results when calling modebutton through interface; pack scripts 2014-03-04 11:26:16 -05:00
Jeremy Goecks 788f023ee9 Automated merge of stable to default. 2014-02-26 14:06:19 -05:00