workflow editor works on IE7 (using excanvas). It actually *nearly* works on IE6 but
there are some layout problems that are probably not worth wasting time on. If any IE
users can test this that would be great!
and tools. Moved some methods related to params out of the Tool class, sets
of inputs can also be used in other ways (e.g. for modules). More abstraction
needed here.
is "InputDataset" which allows a workflow to have an input dataset which many
different tools can use (without needing to specify it repeatedly. Still need
to extract out a common interface (tools will become another type of "module")
which will clean this up a lot.
properly update the 'terminals' for the nodes in the editor. Many other fixes
to saving and loading of workflows (error tracking should now be working
properly).
to drop the `stored_workflow` table if you have it before running this).
Much better separation between the underlying model and the json model used
to communicate with the browser. Various interface improvements. Most things
should work properly now (excepting still dynamic options and input
parameters inside groupings).
a link to workflow management from the tool menu. From there new workflows
can be created and existing workflows edited / run.
Still substantial problems with:
- Selects using "dynamic options" of any sort
- Repeat/conditional tools (no way to connect inputs in a repeat or conditional)
The database / json representation is a real mess. I'm going to completely
redo that next.
- Fixing an event bug in jquery.ui
- Fixing positioning of canvas iframe
- Working around a weird canvas drawing issue (see HACK in galaxy.workflow_editor.canvas.js)
- Removing some JavaScript 1.6 methods
- Workflows have a simple database representation (StoredWorkflow)
- Workflow step parameters can be manipulated
- Workflows can be saved and loaded
- Many improvements to workflow editing interface
2) General interface cleanup
- Styles for the overall layout have been moved from the index page to
CSS files, colors for layout backgrounds and borders and such can now
be configured in the colors.ini file
- Styles and javascript code for dialogs and popupmenus (code is currently
in the workflow editor but will be moved out after more testing)
James Taylor