9 Commits

Include renames

Author	SHA1	Message	Date
Nicola Soranzo	341a6cf760	Use requirements of type="package" instead of deprecated "binary".	2015-05-15 12:43:15 +01:00
John Chilton	8db7eed06a	Add annotated citations various tools.	2014-08-06 09:41:38 -04:00
Jeremy Goecks	9a5679c37c	Use mako template in tool help so that dynamic image paths can be used. Fixes #141	2012-08-07 09:40:51 -04:00
Daniel Blankenberg	a6ecae74fd	Minor tool help updates.	2011-09-08 10:34:56 -04:00
Kanwei Li	2d0b8eb830	Adjust image links in tools to work with a proxy prefix [Brad Chapman]. Fixes #141	2010-12-14 14:22:13 -05:00
Anton Nekrutenko	2763d08d86	Modified help section and help tags to ease paremeter selection by the user	2010-12-03 09:57:45 -05:00
Daniel Blankenberg	00306e15ed	Make boxplot tool respect exit codes when determining job errors: makes e.g. 'Could not find/open font when opening font "arial", using internal non-scalable font' a non-fatal warning. Add version attribute to gnuplot requirement tag.	2010-03-22 11:06:40 -04:00
Daniel Blankenberg	4cb98d8b5f	Add gnuplot requirement tag to boxplot tool.	2010-02-23 19:54:54 -05:00
Daniel Blankenberg	8082c6f36f	Add a new FASTQ tool suite. Four FASTQ variants are supported: sanger, illumina, solexa and solid. ... Tools include: FASTQ Groomer convert between various FASTQ quality formats Combine FASTA and QUAL into FASTQ FASTQ joiner on paired end reads FASTQ splitter on joined paired end reads FASTQ to FASTA converter FASTQ Summary Statistics by column Filter FASTQ reads by quality score and length FASTQ Trimmer by column Manipulate FASTQ reads on various attributes Boxplot of quality statistics (Generic, with outliers)	2010-02-23 16:48:07 -05:00