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1120 Commits
Author SHA1 Message Date
Nicola Soranzo d22f652f91 Merge branch 'release_18.05' into release_18.09 2018-10-12 09:44:18 +01:00
thobalose a1f7634fd7 Updated volume kwds. 2018-10-10 18:28:39 -04:00
mvdbeek 565f611389 Fix remaining selenium py3 erorrs 2018-09-29 13:17:06 +02:00
Bjoern Gruening 8d025aa4ed add graph_dot datatype to graphvis 2018-09-23 19:57:44 +02:00
mvdbeek c5fa023c26 Use webob.compat's FieldStorage in the remaining codebase 2018-07-16 20:15:12 +01:00
Dannon Baker f9ba72f0ae Merge remote-tracking branch 'upstream/release_18.05' into dev 2018-06-20 10:15:29 -04:00
guerler b0212ff45c Add phylip for msa viewer 2018-06-19 17:23:52 -04:00
guerler f6888a32d6 Add fasta datatype to msa viewer 2018-06-19 14:14:44 -04:00
Sebastian Kapust 3c36bec290 Fix tool search overlay link 2018-06-08 13:24:50 -04:00
Dave B 9c58c51ea6 Merge pull request #6206 from gregvonkuster/newick 
Add the newick extension for the Newick datatype,
 2018-06-06 10:26:54 -04:00
greg 8cecfe3042 Add the newick ext to the phylocanvas plugin 2018-06-06 08:42:31 -04:00
Sebastian Kapust 3ec5787f59 Fix tool search overlay link 2018-06-05 17:47:29 +02:00
Dannon Baker ae546cef79 Merge remote-tracking branch 'upstream/release_18.01' into release_18.05 2018-05-25 10:21:54 -04:00
Nate Coraor 221d92f681 Don't use the notebook URL itself for keepalive checks 2018-05-24 15:03:04 -04:00
guerler e11da5fba9 Fix jqplot: boxplot, histogram 
Fix heatmap clustering

Fix nvd3 tool based types

Remove global d3 object from heatmap and jqplot
 2018-05-02 18:42:11 -04:00
Dannon 3922065d8a Merge pull request #5902 from guerler/add_logo_hivtrace 
Add proxy, logo and example file for hivtrace
 2018-04-17 18:40:18 -04:00
guerler 767a456544 Fix proxy, add logo and example file to repo for hivtrace 
Delete example file
 2018-04-17 16:37:56 -04:00
Martin Cech 5d82c1a09f Merge pull request #5807 from dannon/bs4 
Bootstrap 4 !!!!
 2018-04-17 15:21:05 -04:00
Steven Weaver cea328effa adding hivtrace datatype and updating visualization to use it 2018-04-09 16:37:34 -04:00
Steven Weaver ff15eeddbc updating hivtrace plugin to use new static paths 2018-04-09 14:55:05 -04:00
Steven Weaver f1b5849f33 Merge branch 'dev' of github.com:galaxyproject/galaxy into dev 2018-04-09 14:34:44 -04:00
Dannon Baker ae8b8d9fdf Merge remote-tracking branch 'upstream/dev' into bs4 2018-04-09 09:59:46 -04:00
Dannon Baker 075abee766 Merge pull request #5810 from guerler/viz-staging-finalize 
Plugin directory staging
 2018-04-06 09:54:53 -04:00
Dannon Baker 52af42989b Fix scratchbook tour handles. This should fix one remaining selenium 
test for BS4.
 2018-04-05 21:41:03 -04:00
Nate Coraor deda753de9 Do not append '/' to 'js' in GIE static path, this breaks uWSGI static 
routing.
 2018-04-05 14:17:36 -04:00
guerler f2e5a69629 Fix unipept and venn viewers 2018-03-30 16:26:21 -04:00
guerler f0dde506d0 Remove unused static url, fix routes in plugins 2018-03-30 12:50:31 -04:00
Dannon Baker 70915dfc9f Merge remote-tracking branch 'upstream/dev' into viz-staging 2018-03-27 13:49:19 -04:00
Dannon Baker cf2e6dc6d2 Fix scatterplot as example of mako entrypoint -- this needs to be generalized 2018-03-26 13:48:51 -04:00
guerler e0572e104f Merge branch 'dev' into visualization_header 2018-03-22 08:41:09 -04:00
guerler 7c3c36e762 Add logo for scatterplot 2018-03-22 08:36:28 -04:00
Dannon Baker 2ecf3ff239 Lock a local parcel build to scatterplot (instead of my global, which was same version -- no need for a viz rebuild here) 2018-03-22 08:18:08 -04:00
Dannon Baker f6ae449ce8 0BSD is probably more correct here. 2018-03-21 13:11:53 -04:00
Dannon Baker 77d68846a1 Strip stray debug... 2018-03-21 11:30:04 -04:00
Dannon Baker 9a11327b5e Add final scatterplot build. 2018-03-21 11:27:09 -04:00
Dannon Baker e92ceea1f7 Fix scatterplot. 2018-03-21 11:24:28 -04:00
Dannon Baker 4fb391b127 Babelrc fixes 2018-03-21 09:26:46 -04:00
Dannon Baker fa5fae50c5 Fix license specifier to valid spdx form 2018-03-21 09:24:10 -04:00
Dannon Baker 66643bd58c Try babel/importloader for parceljs. More structure overhaul 2018-03-21 09:19:11 -04:00
Steven Weaver ac409cf558 adding initial hivtrace-viz visualization 2018-03-15 13:07:16 -04:00
guerler c07c17e93d Restore missing src for msa 2018-03-13 14:16:23 -04:00
guerler e0c25f4266 Enable example 2018-03-09 14:13:07 -05:00
guerler 7d95d28d7c Increase priority for trackster 2018-03-09 12:22:58 -05:00
guerler 553474ddfd Hide example plugin 2018-03-09 11:55:11 -05:00
guerler dc3cd00354 Add additional descriptions 2018-03-09 10:49:12 -05:00
guerler b35a4dfe01 Add description for trackster and other visualizations 2018-03-09 10:38:58 -05:00
guerler 04bfefb7da Merge branch 'dev' into visualization_header 2018-03-08 08:59:49 -05:00
John Chilton 5e6c1c9f51 New abstraction to obtain tool test data paths. 
Can be shared between tests and TDTs. A step toward not requiring one to load the tool to test the tool (important for external testing of tools).
 2018-03-06 20:07:51 -05:00
guerler e01d1a0049 Fix data validation for pie charts 2018-03-05 20:12:16 -05:00
guerler eadeb0f917 Add additional data validation 2018-03-05 20:07:03 -05:00